Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00912 ATTTTGTATAGACCTATTAAAGATTTACGTGGAATTCTGGGTGCCAAATCACTGTTTATTTGCTCGACAGGATACCAAAGGCAAGATCGAGATGATATTATGAGAATGGTAGGGCTGATGGGTGCACACTTCTCCAAGCCTTTGGTAGCAAATAAAGTTACTCATCTTATATGCTACAAATTTGAGGGTGAGAAGTACGAGCTTGCGAAGAAAATGAAGAAGATAAAGCTTGTCAATCATCAGTGGTTGGAAGACTGTTTAAAAGCATGGGAAATCCTCCCAGAATGTAATTATAACAAGAGTGGTTATGAGTTAGAGATGATGGAGGCTCAAGCTAAGGATTCCGAAGAAGAAACAGAAGAGGATAGAGATACTAAGCAATCTAGGGAGAGAAATATTGCAGGGAATCCTTTTAACTTGCAAGGTGGAAGTGAAATTTTGACTTCAAAGGTCTCTGAGTTGCCCATGCCAATAGGGGAAGTGTCAAAGATCCATCAACATGCAGATGCATTTAAAAGCTTGCCAGATATCACTGAAGATATTGTTACTAACAAGAGGTTGTCAATTAGTCCCGCAAAACAGACCAGATCTGATGAAGCTCCAGACTTACATGATGTAAATAAAAAGGGCCAAGAGGAGTTTGACTGTGAGGGCACTGGAGCTTATTGTAGGGATGATATTAGTGGTCGGGTGTCCTCCCCATATGGCAAAAATCCCAACATTAGCAGAGAAGGCATTAAATCTAACACAAGAAATGCTAAAAGATCCCCGCACTCTGATGCAGCAAAATTAAGCACTCTCAGTTACTCAAGGAAAAACCCAAGGAGATCTCCAGTGTCAATTTTCTCAGAAGAACTGTCTGCACGTGGCTCTCTAGGACATTCAGAAGAAGACAAAGACAAGGATGGTTTTGACGTCTTGCCTCTAAAAGTAGAACGAGCTAAGAATAATCTTGATTTTGGTGGAATCCCAATTTCAAGGAATGATTCAGAGTTACATCACGGTGCAGGAAAAATTGGTACATTGGCTCAGAAAAGAACAATGGTTCTTTCCATTAGATCACCTACGAAAGGGAGTCCTAGCTCAAAAGCTCGTGCCACAGGAACTCCATCCGCAAATACTAGACCTGACGAAGTCACGACTGGTGCAGCAAAATTAAGTACTCTCAGTTACTCAAGGAAAAACCCAAGGAGATCCCCAGTTTCAATGTTCTCGGAAGAACTGTCAAGTCATGCACGCGGCTCTCCTCAAGGACACTCAGAAGAAGACAAAGACAAGGATGGTTTTGACATCTCGCCTCTAAAAGTAGAACGATCTAAGAATAACCTTAATTTTGGTGGAATCCAAATTCCAAGGAATGACTCAGAGTTACATCATGGTGCAGGGAAAAGTGGTACATTGGCTCAGAAAAGAACAATGGTTATTTCCATTACTAGCTGTAGATCACCTACGAAAGGGAGTCCCAGTTCAAAAGGCTGCACCACAGGAAGTCCATCCACAAGTACTAGACCTGAAGGAGTCGCGATTGGTGCACCCCAGATGCATTCCATTCCTTCTATTAGAAGTAGTAGCCATTCTATGGATGGGATTTCTGTTGTGAATTCTACAGAGAATGAATTTGCTAGCCTGTCAGAAACTAAGTCTTTATATTTCAACAAGAAATCATTGAAACGTGGATTGCCTGTTTCAAGAACTACAATTTCTGATGGAATTGAATTCCCTTTAGATATTAAAATGTTGGACTTTACCAAGGAGAGGACACCTGAAACATCTTGGGGTGGATTGAAACAGTCCAACTTGGCTACTGCACTTGATGTTGGGGATTTTGGAATGAACAGATCAACATACCTGGCTGGCAAAATAGAAGAGCCCCAGAAACAGCACCAGGATGGAGAGATCTCGTCTCCCAATACTAGAAACTCTGGGATTGAGCAGTCCAGAAGTCCTGTTAACTTGGCTGTAGGAAAAGGAAGGAAGAATGAAGCATCTTCAAGATCACTTAAAAAAAGGAATTTGAGCTCCAGACCTAAGCTAAGTACAGGTAGTACTAGTAAATGCCAAGGTTCTCTTTACTTGGATAAAACAGACACCCCAAACGAAGCTAACTCATGTTCAGTAGAAGGCAAAGATGGAAGAGAGCATGAAAATATATTTAGTGTTAAACCCGAGATGGCCGGACCAACGTTTAAAGCAGATGAAGTCATTGGGGAAAAGGAAAAGGTGGTTCAATGTTCTGCTAATAATATTGAGAATGCAACTGTGTGCAAGGGTGATGAGACTCAGGCTCCAGAGGGAGACAATGATGGAGCAGAGCTTGAGAAGGCAGGTAGTGAGGAAAAGGTGGAGCCAACTTTTAAATTAGATGTAGCCTTGGAAGAAAAGTCAGAAGGGTTGCAACATTCAGCAAATGGAATTAAGAGAGATATTGAATGTATGGATGGTGGGATAATGGCTTCAGGGGAAGATGGAGGAGAGCTTGAGAAGGCAATTAGTGGCAAGAAGGCTGAGGTGGGTGAGTTGACTTCTAAAGCAGATGCAGTGAAGGAGGAAATGTCGAAAGGGAGACAACATCCTCCCAGTAAAACCAAGAAAAATGCTGTCTCTGCTGTGAAAGAAATAGAGACATCTGGGAAAGGCAAAGACAAAGTAGAACTCAAGAACAAAACCAATGATGAAAAGATGGAGATGGAGAAGGAAGAAGGGGTGCTATGTCCTGCAAGTAAACCCAAGAGTAAGACTGTATATGTGAATAAGACAGAGAAGCCCATGGATGCGGAGAAGGAGAACAAGCCAATTGAAAATGGAGGTCAGAGTGTGAATTCAGGTAAACGTAAGAGGGCAAAAGTGGCTGTTAAATCTAATAGAACGCCAATGCAGGTTAATGAAATGGTTGATAGAGCTGATCTGGACAGAATGAATGCGGGTGGAGGTTCAAATTTTGTAAGCTCTGAGCCTGTGTGGTTTATACTCAGTGGACATCATCTACAGAGAAAGGAGTTCCAGCTGGTCATAAGGCGTTTGAAGGGAAGACTCTGTAGAGATTCTCACCACTGGTGTTACCAGGCTACACACTCTATTGTTCCAGATCCGGTACGAAGGACAGAGAAGTTCTTTGCTGCTGCAGCATCTGGCAGGTGGATTCTGAAGACAGATTACCTGACTGCTAGTAATCAGGCGGGAAGGTTCTTGGAAGAGGAACCTTATGAATGGTTCAGGAACGGCCTTAGTGAAGATGGTGCAATCAATTTAGAAGCTCCAAGGAAGTGGCGCCTTTTAAGAGAAAGGACTGGTCATGGTGCCTTCTATGGAATGCGCATTATCATATATGGAGAATGCATTGCACCCCCTCTGCGATCTTTGGATTAA 3366 0.4248 ILYRPIKDLRGILGAKSLFICSTGYQRQDRDDIMRMVGLMGAHFSKPLVANKVTHLICYKFEGEKYELAKKMKKIKLVNHQWLEDCLKAWEILPECNYNKSGYELEMMEAQAKDSEEETEEDRDTKQSRERNIAGNPFNLQGGSEILTSKVSELPMPIGEVSKIHQHADAFKSLPDITEDIVTNKRLSISPAKQTRSDEAPDLHDVNKKGQEEFDCEGTGAYCRDDISGRVSSPYGKNPNISREGIKSNTRNAKRSPHSDAAKLSTLSYSRKNPRRSPVSIFSEELSARGSLGHSEEDKDKDGFDVLPLKVERAKNNLDFGGIPISRNDSELHHGAGKIGTLAQKRTMVLSIRSPTKGSPSSKARATGTPSANTRPDEVTTGAAKLSTLSYSRKNPRRSPVSMFSEELSSHARGSPQGHSEEDKDKDGFDISPLKVERSKNNLNFGGIQIPRNDSELHHGAGKSGTLAQKRTMVISITSCRSPTKGSPSSKGCTTGSPSTSTRPEGVAIGAPQMHSIPSIRSSSHSMDGISVVNSTENEFASLSETKSLYFNKKSLKRGLPVSRTTISDGIEFPLDIKMLDFTKERTPETSWGGLKQSNLATALDVGDFGMNRSTYLAGKIEEPQKQHQDGEISSPNTRNSGIEQSRSPVNLAVGKGRKNEASSRSLKKRNLSSRPKLSTGSTSKCQGSLYLDKTDTPNEANSCSVEGKDGREHENIFSVKPEMAGPTFKADEVIGEKEKVVQCSANNIENATVCKGDETQAPEGDNDGAELEKAGSEEKVEPTFKLDVALEEKSEGLQHSANGIKRDIECMDGGIMASGEDGGELEKAISGKKAEVGELTSKADAVKEEMSKGRQHPPSKTKKNAVSAVKEIETSGKGKDKVELKNKTNDEKMEMEKEEGVLCPASKPKSKTVYVNKTEKPMDAEKENKPIENGGQSVNSGKRKRAKVAVKSNRTPMQVNEMVDRADLDRMNAGGGSNFVSSEPVWFILSGHHLQRKEFQLVIRRLKGRLCRDSHHWCYQATHSIVPDPVRRTEKFFAAAASGRWILKTDYLTASNQAGRFLEEEPYEWFRNGLSEDGAINLEAPRKWRLLRERTGHGAFYGMRIIIYGECIAPPLRSLD* 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00912 1121 Gene3D BRCT domain 6 134 IPR036420 -
Eupl12g00912 1121 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 364 794 IPR044254 -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 847 867 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 630 648 - -
Eupl12g00912 1121 SMART BRCT_7 10 90 IPR001357 -
Eupl12g00912 1121 SMART BRCT_7 978 1060 IPR001357 -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 621 710 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 233 247 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 352 415 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 480 504 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 921 952 - -
Eupl12g00912 1121 Gene3D BRCT domain 981 1096 IPR036420 -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 259 277 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 227 304 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 109 139 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 761 781 - -
Eupl12g00912 1121 SUPERFAMILY BRCT domain 987 1070 IPR036420 -
Eupl12g00912 1121 CDD BRCT_TopBP1_rpt7 987 1060 - -
Eupl12g00912 1121 Coils Coil 105 125 - -
Eupl12g00912 1121 ProSiteProfiles BRCT domain profile. 8 100 IPR001357 -
Eupl12g00912 1121 SUPERFAMILY BRCT domain 17 99 IPR036420 -
Eupl12g00912 1121 CDD BRCT_PAXIP1_rpt4 20 91 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 290 304 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 352 437 - -
Eupl12g00912 1121 Pfam twin BRCT domain 19 82 IPR001357 -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 669 704 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 758 781 - -
Eupl12g00912 1121 MobiDBLite consensus disorder prediction 416 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00912 Eupl-Chr12 25095063 25164775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00912 36 121 Core DNA Replication Machinery Family AT4G02110 74.419 2.41e-37 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00912 K10728 - ming:122092045 677.167