Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00888 ATGCCCATGTCAACAGCCACGTCCAAATGGAAGAAACACTCCTCCGGAAGAAATACCGGCGCTAAGCGCCTTAAAAACCCTCTTGCATTGTCGGCATTCGGGGGAGTTGTCTCGGAAGAAGACGAGATTCATCTCCTTAAAGCCTTCCTCGAAATTATCGAAACCTCCAAAAACTCTTCGTCTCCGGCCACCACCGCTGCTTCGCTTCTCAAATCTCTCAGCCATGAAGCTAATATGACCCAACTGATCAAAAAGCTCCGTGGATTACGAGAGAAATACAAAGCACAACTCCACAACAAACCCTCCATTAAAACCCCTCACGAGCAGGAGGTTTTTGAGATCTCTCACAAGATCTGGTGCAACTCTCGTCGTTCCTCGAAAAAACCACAACTTGTTAATTTTACCGTGAAAGAGGAATCAAAAACCCTAGCTGATACTTCAAGGAACGAAAATGGAAGAGTTGAGGATGAAGAAGTGAAATTGGGGGAAAAGCATTCAGTTTTGATAGAAGAGATGTCTTGGTCGGCTGGGAAAGCGTTTCTGATGAAGGGATTGCAGTGTTTGGAGGAATCACAATTGGATTATTTGAACGAGCAGTGGCGGTTGCAGATGATTGCAGAAGCAGAGGTTTCAGCAATGAAGTTTGAGCTTTTCCAAATGCAAACCAACTTGATTTTGAACGCCATCATCTCTCCGTCCCCCGGCCCCGCTTGA 714 0.4594 MPMSTATSKWKKHSSGRNTGAKRLKNPLALSAFGGVVSEEDEIHLLKAFLEIIETSKNSSSPATTAASLLKSLSHEANMTQLIKKLRGLREKYKAQLHNKPSIKTPHEQEVFEISHKIWCNSRRSSKKPQLVNFTVKEESKTLADTSRNENGRVEDEEVKLGEKHSVLIEEMSWSAGKAFLMKGLQCLEESQLDYLNEQWRLQMIAEAEVSAMKFELFQMQTNLILNAIISPSPGPA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00888 237 Pfam Protein of unknown function, DUF573 38 119 IPR007592 GO:0006355
Eupl12g00888 237 MobiDBLite consensus disorder prediction 1 22 - -
Eupl12g00888 237 PANTHER BNAANNG10740D PROTEIN-RELATED 11 228 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00888 Eupl-Chr12 24834652 24835664 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00888 38 119 GeBP Transcription Factor Family AT5G28040 40.659 8.80e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Eupl12g00888 DUF573 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00888 - - nnu:104586199 147.517