Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00886 ATGTCCATGTCAACAGCCACGTCCAAACGGAAGAAACACTCCTCCGGAAGAAATTCCGGCGCTAAGCGCCGGAAAAACCCTCTTGCATTGTCGGCATTCGGGGGAGTTGTCTCAGAAGAAGACGAGATTCATCTCCTTAAAGCCTTCCTCGAAATTATCGAAACCTCCAAAAACTCTTCGTCTCCGGCCACCACCGCTGCTTCGCTTCTCAAATCTCTCAGCCATGAAGCTAATATGACCCAACTGATCAAAAAGCTCCGTGGATTACGAGAGAAATACAAAGCACAACTCCACAACAAATCTTCCATTAAAACCCGTCACGAGCAGGAGGTTTTTGAGATCTCTCACAAGGTCTGGTGCAACTCTCGTGGTTCCTCGAAAAAACCACAACTTGTTAATTTTACCGTGAAAGAGGAATCAAAAACCCTAGCTGATACTTCAAGGAACGAAAATGGAAGAGTTGAGGATGAAGAAGTGAAATTGGGGGAAAAGCATTCAGTTTTGATAGAAGAGATGTCTTGGTCGGCTGGGAAAGCGTTTCTGATGAAGGGATTGCAGTGTTTGGAGGAATCACAATTGGATTATTTGAACGAGCAGTGGCGGTTGCAGATGATTGCAGAAGCAGAGGTTTCAGCAATGAAGTTTGAGCTTTTCCAAATGCAAACCAACTTGATTTTGAACGCCATCATCTCTCCGTCCCCCGGCCCCGCTTGA 714 0.4594 MSMSTATSKRKKHSSGRNSGAKRRKNPLALSAFGGVVSEEDEIHLLKAFLEIIETSKNSSSPATTAASLLKSLSHEANMTQLIKKLRGLREKYKAQLHNKSSIKTRHEQEVFEISHKVWCNSRGSSKKPQLVNFTVKEESKTLADTSRNENGRVEDEEVKLGEKHSVLIEEMSWSAGKAFLMKGLQCLEESQLDYLNEQWRLQMIAEAEVSAMKFELFQMQTNLILNAIISPSPGPA* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00886 237 MobiDBLite consensus disorder prediction 1 27 - -
Eupl12g00886 237 Pfam Protein of unknown function, DUF573 38 119 IPR007592 GO:0006355
Eupl12g00886 237 PANTHER BNAANNG10740D PROTEIN-RELATED 10 228 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00886 Eupl-Chr12 24801949 24802961 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00886 38 119 GeBP Transcription Factor Family AT5G28040 41.758 3.23e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Eupl12g00886 DUF573 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00886 - K14826 nnu:104586199 148.288