Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00883 ATGAGTGGTGAAGAGTGTGCAGAGATCATGGATAAACAAGCATGCCCAATTGAATTCATAAACATCGAAAATCACTTAGTTGGAGAAGACGAAGGAGAGTCGAGAAATGAACCATATGTGGGGTTGGAATTTGATTCTACGGAGGATGCATATGAATTTTACAAAGGATATGCAGTTAATTCAGGATTCAGCATTCGGGTTGGTCAATTATGCCGTTCAAGGACTGACGGATCTGTTGTATCTCGGAAATTTGTGTGCTCGAAGGAGGGATTTCAACAGCCTTCAACGGTTGGTTGTCAGGCACTAATAAGGGTACAGATACAAGAATTGGGAAGGTGGGTTGTTGACCTTTTTCGGAAGGACCATATGTGCCAGAAATCAGGAGCAGGATCAACCGAGATTATGTCGAATCTAAAAGAAGCAGAGGTACAAGCATGCCCGACAGGAGTTGTTAATGTTAAAAACCACACGAGGGAAGAGAATGGAGAGTCGCAACTCGATTCATTCGCAGGAATCACATCGCCTGAAATCATTTCAACACTGGAAGACACGGGTGGTGGATCAGAAAATGTGGGTTTCAATAACAAGGATCATAGTGACTGTATCAAAAGAAGCCGAAGAAATAACATTGGAAGTGATTGGTATTGTGTGCTCTTGGAGTATTTCCAGTGTAAGCAAGCAGAAGATCCAGGATTCTTTTAA 702 0.4231 MSGEECAEIMDKQACPIEFINIENHLVGEDEGESRNEPYVGLEFDSTEDAYEFYKGYAVNSGFSIRVGQLCRSRTDGSVVSRKFVCSKEGFQQPSTVGCQALIRVQIQELGRWVVDLFRKDHMCQKSGAGSTEIMSNLKEAEVQACPTGVVNVKNHTREENGESQLDSFAGITSPEIISTLEDTGGGSENVGFNNKDHSDCIKRSRRNNIGSDWYCVLLEYFQCKQAEDPGFF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00883 233 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 122 - -
Eupl12g00883 233 Pfam FAR1 DNA-binding domain 52 122 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00883 Eupl-Chr12 24752544 24753589 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl12g00883 FAR1 3.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00883 - - qsa:O6P43_003464 173.326