Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00868 ATGGCAGGCGATATCCTTGGTTGGATCCATCGGATGGCCATGGGTAGCATCGGTGAAGACAAAGAATCAATGTCCAAGCAGGTTGGGAAACACAACCCCTACAATGGGGGTGAGGTCATGTTACCTCGTGACTCTTCATCCTCTCTAATCCCCTCACAACCTTCTTCTTCTCATCCTCTTCATCCTCCTCTCTGTGTCTGTGTCTCTGAGCTCATGGGGACTCACCCCGCTGTTGCACCAGCAAGACCACTTGGTCTTCCTAAGCACACTCATGTCCATCATCACCATGATCATGGAATAAGTCGACCCTCCATTCTCATTATCATCATACCCATTGTCTCAATTGTCCTACTTTTCGCAACATTTTTAATTATCGTAATGTTTCGTAGACGCAAGTCCGCGAAAAATAATCTAAGCAGCAGCAACAGCAGCAGCAGCAGACTTTGCAAGTTGAGCATTCATAGTAGCCCAGATGTGAGGAGCATTGGATGTTTTTATGGAGAGAATTTATGTCTTGCAACTCCAAGTAAATACAGAGGAGTGCAAGTTTTCACATACAAGGAGCTCGAATTGGCGACAGATGTATTTGGTGAAGCAAATGTTATTGGCAATGGAGGGTTTGGAGTGGTTTACAGAGGGATTTTGAGTGATGGGACTGTTGTGGCAATTAAGAGGTTGCATAGGGAAGGGAAGCAAGGGGAGCGTGAGTTCAGAATTGAGGTGGATCTGTTGACCCGCTTGCATTCTCCCTACTTGGTTGATCTGCTGGGCTACTGTGCTGACCAACACCACCGGCTCCTTGTTTTCGAATTCATGCCAAATGGTAGTCTCCAAAACCACCTCCACCCCTCTCACAAGCAACATCAGCCATTAAACTGGGGGACCCGGTTGAGGATCGCCCTCAATTGTGCCAGAGCTCTCGAGTTCCTCCATGAACACGCAGTCCCATCTGTTATCCACAGGGATTTCAAATGCAGCAATGTTTTATTAGATCATAACTTCAGGGCTAAAGTGACAGATTTTGGGTTGGCTAAGATGGGTTCTGACAAGATCATTGGTCAGGTCTCAACACGTGTGCTAGGGACAAGTGGATACCTGGCGCCCGAGTATGCGTCGACAGGCAAGCTAACCACAAAATCGGATGTTTATAGTTATGGGGTTGTTCTTCTAGAGCTACTAACGGGACGTATACCTGTGGATACCAAGCGCCCTCCGGGAGAACAACTCCTTGTCTCATGGGCTCTTCCAAGGTTGACCAACAGAGCAAAAGTTGAGGAAATGGTTGACCCAGCTCTACAAGGCCAATATTCAAAGAAGGAACTGGTTCAGGTAGCTGCCATCGCTGCCGTGTGTGTGCAACAAGAAGCCGATTATCGACCACTCATCACAGATGTTGTGCAGTCTCTCATCCCTCTAGTTAAGAGCTACTCCACGACTTTTCCCTCCACCTCCTCCAGATTTCGGAATCGAACAGTAAGTCCAAGGTATTAA 1491 0.4748 MAGDILGWIHRMAMGSIGEDKESMSKQVGKHNPYNGGEVMLPRDSSSSLIPSQPSSSHPLHPPLCVCVSELMGTHPAVAPARPLGLPKHTHVHHHHDHGISRPSILIIIIPIVSIVLLFATFLIIVMFRRRKSAKNNLSSSNSSSSRLCKLSIHSSPDVRSIGCFYGENLCLATPSKYRGVQVFTYKELELATDVFGEANVIGNGGFGVVYRGILSDGTVVAIKRLHREGKQGEREFRIEVDLLTRLHSPYLVDLLGYCADQHHRLLVFEFMPNGSLQNHLHPSHKQHQPLNWGTRLRIALNCARALEFLHEHAVPSVIHRDFKCSNVLLDHNFRAKVTDFGLAKMGSDKIIGQVSTRVLGTSGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRIPVDTKRPPGEQLLVSWALPRLTNRAKVEEMVDPALQGQYSKKELVQVAAIAAVCVQQEADYRPLITDVVQSLIPLVKSYSTTFPSTSSRFRNRTVSPRY* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00868 496 Gene3D Transferase(Phosphotransferase) domain 1 272 488 - -
Eupl12g00868 496 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Eupl12g00868 496 PANTHER OS07G0668900 PROTEIN 155 476 - -
Eupl12g00868 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Eupl12g00868 496 CDD STKc_IRAK 202 472 - -
Eupl12g00868 496 ProSiteProfiles Protein kinase domain profile. 196 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00868 496 FunFam Receptor-like serine/threonine-protein kinase ALE2 272 486 - -
Eupl12g00868 496 Pfam Protein kinase domain 199 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00868 496 FunFam Serine/threonine-protein kinase PBS1 166 271 - -
Eupl12g00868 496 Gene3D Phosphorylase Kinase; domain 1 172 271 - -
Eupl12g00868 496 SUPERFAMILY Protein kinase-like (PK-like) 178 470 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00868 Eupl-Chr12 24569138 24578923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00868 180 475 Receptor kinase-like Gene Family AT3G58690 66.890 1.53e-144 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl12g00868 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00868 - - cave:132170273 559.681