Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00859 ATGGATTCCTTCAACAGGTGGGGTCGGAAAGAGAAGGTTGTGGTAGTGATGGGGGCCACGGGGACCGGAAAATCGAGGGTTTCCATCGAACTTGCAACCCGTTTCGCAGCTGAGATTGTAAACTCCGATAAAATACAAGTTTATGAAGGGCTTGATATTCTTACCAACAAGGTCACCGAGAAGGAGCAGTGTGGGGTCCCACACCATCTTTTGGGAGTTGTGGACCCTGATGCCGAGTTCACTGCAGCTGATTTCCGATGTGAAGCGTTGCGTGCTGTCGAGTCGATTGTGGGACGGAACCGGCTACCAATTATCGTAGGCGGTTCCAATTCGTACATCAAACAATTGGTGGACGACGATGAACTTGAATTCAGGTCCAAGTATGAGTGTTGCTTCCTTTGGGTTGATGTATCATTGCCTGTACTACACTCTTTTGTGGGTAAGCGGGTTGATCAAATGGTTAAAGCCGGTTTGGTGGACGAGGTGCGGAAAATGTTTGAGCCGGAGGCAGACTATAGGCGTGGAATTAGGCGTGCGATCGGGGTCCCCGAGATGGATCAATATCTTCGGGCTGAGAAAACTGTAGATGAAGAAACTCGGGCAAGACTACTTGAAACAGCGATTGATGAGATCAAGGCCAATACATGCAAATTAGCATGTTGTCAAATTGACAAGATCAACCGTCTCCAAACCTTGTCGGGGTGGAACGTGCACCGCCTCAATGCTACCGAAGTTTTCCTTAAGAATGGTAGAGAAGCAAATGAGGCATGGGAGGAACTTGTGGGCCGACCCAGCACTATGATCGTTAAGCAGTTTCTCTACAACAATGAAGATTGTAAGGCCACCCCCACCACCCCGGCAGCCATAAGAATGTTGCCTATGGCGACGGCTGTTGCAGCCAACTTGCCATAG 912 0.4934 MDSFNRWGRKEKVVVVMGATGTGKSRVSIELATRFAAEIVNSDKIQVYEGLDILTNKVTEKEQCGVPHHLLGVVDPDAEFTAADFRCEALRAVESIVGRNRLPIIVGGSNSYIKQLVDDDELEFRSKYECCFLWVDVSLPVLHSFVGKRVDQMVKAGLVDEVRKMFEPEADYRRGIRRAIGVPEMDQYLRAEKTVDEETRARLLETAIDEIKANTCKLACCQIDKINRLQTLSGWNVHRLNATEVFLKNGREANEAWEELVGRPSTMIVKQFLYNNEDCKATPTTPAAIRMLPMATAVAANLP* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00859 303 Pfam IPP transferase 46 119 - -
Eupl12g00859 303 Pfam IPP transferase 125 223 - -
Eupl12g00859 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 139 237 - -
Eupl12g00859 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 170 IPR027417 -
Eupl12g00859 303 Gene3D - 10 273 IPR027417 -
Eupl12g00859 303 FunFam Adenylate isopentenyltransferase 5, chloroplastic 10 164 - -
Eupl12g00859 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 273 IPR039657 -
Eupl12g00859 303 FunFam Adenylate isopentenyltransferase 5, chloroplastic 139 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00859 Eupl-Chr12 24463243 24464804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00859 126 289 C2H2 Transcription Factor Family AT2G27760 33.508 2.12e-26 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00859 K10760 - msin:131226107 423.32