Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00845 ATGAAGCACTTACATGAAGAACCACCACCCTCTGATAATTCAAACGAAGCGTCTTCAAGTGGAGAATCACAAGGTGATCAAGAGATGGGGATCCATACTATCTCGAACAATGGAGATACCCCAGCGGAGGATGCAACGACCATCTGTCGCTTTGCATGTGGAATGGATCTCAACCCCGCTCGCATGGTATTTGCAGAAATGGTGGGAACCTTCATTTTGGTGTTTTGTGTGTGTGGGATAATAGCTAGCACACAGCTGATGAGAGGTGAAGTTGGTCTCTTGGGGTACGCAGCCACAGCTGGCTTAGCAATAGTCGTCCTGATTTTCTCTATTGGACCCATCTCGGGTGCGCACATTAACCCCTCCATCACCTTTGCCTTTGCAACCATAGGTCAATTTCCATGGTCCATGGTTCCCTTTTACATTATTGCACAAATTGTGGGGTCAGTGTTAGCAACATACGTGGGGAAGGCTGTGTACGGCATCCAGACAGTTCTAGTGACCACCCAACCACTCCATGGCCGCAAGACGGCCTTCTGGGCGGAGTTCATTGCTACCTTCATCATCATGTTCCTAGCAGCGTCAATGTCGACCAAAGCTCATGGTGTAGGCCAGTTCTCTGGTTTTGTAGTCGGTATGGCAATCGCACTCGCAGTTCTGATCACTGGGCCTGTTTCGGGAGGATCGATGAACCCGGCTAGGTCACTTGGTCCTGCAATTGTTTCATGGAGATTCGATGACATATGGTTGTACATTCTTGCCCCGACTGTTGGGGCCGTGGCAGGCGCTCTTCTCTTGCGATTGTTACGTCTTCAACGCCGACCTTGCTCACCCTCTACCTCCCCTAATGCTGGCCTACCTGCTGCCAAGTGA 873 0.5052 MKHLHEEPPPSDNSNEASSSGESQGDQEMGIHTISNNGDTPAEDATTICRFACGMDLNPARMVFAEMVGTFILVFCVCGIIASTQLMRGEVGLLGYAATAGLAIVVLIFSIGPISGAHINPSITFAFATIGQFPWSMVPFYIIAQIVGSVLATYVGKAVYGIQTVLVTTQPLHGRKTAFWAEFIATFIIMFLAASMSTKAHGVGQFSGFVVGMAIALAVLITGPVSGGSMNPARSLGPAIVSWRFDDIWLYILAPTVGAVAGALLLRLLRLQRRPCSPSTSPNAGLPAAK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00845 290 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Eupl12g00845 290 Pfam Major intrinsic protein 60 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 Gene3D Glycerol uptake facilitator protein. 36 278 IPR023271 -
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl12g00845 290 PANTHER AQUAPORIN NIP2-1 37 273 IPR034294 -
Eupl12g00845 290 MobiDBLite consensus disorder prediction 11 39 - -
Eupl12g00845 290 MobiDBLite consensus disorder prediction 1 39 - -
Eupl12g00845 290 SUPERFAMILY Aquaporin-like 58 274 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00845 Eupl-Chr12 24292909 24295367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00845 15 281 Major Intrinsic Protein MIP AT5G37820 36.940 2.47e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00845 K09874 - mof:131150221 354.755