Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00829 ATGGCGGTTGATCTCGAATCTTTATCAGAGGCGACTTCAGGCGCCATTGGAGCTCTGCTGAGCACAACCATTCTCTATCCCCTCGATACATGTAAGACTAAGTACCAAGCCGAAGTTAGAGCACAAGGCCAGCAAAAGTACAGGAATCTCTCCGATGTTTTGTGGGAAGCAATCTCTACCCGTCAAGTTCTTTCATTGTACCAGGGGCTCGGGACCAAGAACTTGCAATCCTTCATTGCACAGTTTGTCTACTTCTATGGTTACAATTACTTTAAAAGGCTGTACCTAGTGAGGAGTGGAAACAAATCGATTGGAACAACAGCAAACTTGATTATTGCGGCTGCTGCTGGGGCTTGCACTGCCATAGTGACACAGCCCCTAGATACGGCATCCTCGAGGATGCAGACAAGCGCTTTCGGGAAATCCAAAGGGCTTTGGGAAACCCTTTCGGAGGGCACTTGGAGTGAGGCATTCGACGGCCTTGGCATCTCTCTTCTTTTGACCTCGAACCCTGCTATCCAGTACACTGTATTTGATCAGCTGAAACAAAGATTACTGAAGGAGCAACAGAGTAAAAAAACAGGCATAGAGGCCCCTGAAGCGCTATCTGCCTTCTCAGCTTTTGTGTTGGGTGCAGTCTCAAAGAGCATTGCCACTTTTTTGACTTATCCAGCAATCAGGTGTAAAGTCATGATTCAGGCTGCCGACCCGGATGATGATGGAACGAATAAAGCTCAACCCAAGTCGCCTAAAACGGTGTTGGGAACAATATATGCTATTTGGAGAAAAGAAGGGCTGCTGGGCTTCTTCAAAGGGTTGCACGCTCAGATCCTGAAGACTGTGCTGAGCTCAGCCTTGCTTTTGATGATCAAGGAGAAGATCACAAGGACGACATGGGTCCTCATGCTTGCACTTCAGAGGTATCTGTTGCGCTCACCGAGTAGATTAAAGAGTGCTTGA 960 0.4771 MAVDLESLSEATSGAIGALLSTTILYPLDTCKTKYQAEVRAQGQQKYRNLSDVLWEAISTRQVLSLYQGLGTKNLQSFIAQFVYFYGYNYFKRLYLVRSGNKSIGTTANLIIAAAAGACTAIVTQPLDTASSRMQTSAFGKSKGLWETLSEGTWSEAFDGLGISLLLTSNPAIQYTVFDQLKQRLLKEQQSKKTGIEAPEALSAFSAFVLGAVSKSIATFLTYPAIRCKVMIQAADPDDDGTNKAQPKSPKTVLGTIYAIWRKEGLLGFFKGLHAQILKTVLSSALLLMIKEKITRTTWVLMLALQRYLLRSPSRLKSA* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00829 319 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Eupl12g00829 319 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Eupl12g00829 319 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Eupl12g00829 319 Gene3D Mitochondrial carrier domain 3 299 IPR023395 -
Eupl12g00829 319 SUPERFAMILY Mitochondrial carrier 8 293 IPR023395 -
Eupl12g00829 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 297 IPR018108 -
Eupl12g00829 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Eupl12g00829 319 FunFam Peroxisomal adenine nucleotide carrier 1 3 298 - -
Eupl12g00829 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Eupl12g00829 319 Pfam Mitochondrial carrier protein 103 188 IPR018108 -
Eupl12g00829 319 Pfam Mitochondrial carrier protein 6 96 IPR018108 -
Eupl12g00829 319 Pfam Mitochondrial carrier protein 202 296 IPR018108 -
Eupl12g00829 319 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 318 IPR045900 GO:0005347|GO:0006635|GO:0015217
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00829 Eupl-Chr12 24117318 24126153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00829 23 310 Chloroplast and Mitochondria Gene Families AT1G25380 29.139 7.96e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00829 - - aew:130787136 504.982