Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00827 ATGATCCAAGACATCTTCGGATCTGTTCGTCGATCTCTAGTCTTTCGAAGCGCAGATGGAGGAGATGAAGGAGGAGGTCTGGCTGAGAAGATCGGTTCTTGTATTCGGAAATCGAGGGTGGGGATTTTCTCCAGACCATCACCCCCTGCGCTGCCTCCGCCTCCGCCTCCGATCCCCAAGGACAACACACCTCCGATCCGATGGCGGAAAGGCGAATTGATTGGTTGCGGTGCCTTCGGTCGAGTTTATATGGGGATGAATCTAGATTCCGGAGAGCTTCTCGCCGTTAAACAGGTTTCGATCGCGGTGAACAATGCTTCGAAGGAGAAAGCACAGGCTCATATTCGGGAGCTCGAGGAAGAAGTGAAGCTTCTCAAGAATCTATCACATCCGAACATCGTGAGATATTTGGGAACTGCTAGGGAGGAGGGGACTTTAAATATTCTGCTGGAATTCGTCCCCGGAGGATCCATCTCGTCACTTCTTGGGAAATTTGGTTCCTTCCCTGAGGCTGTTATTAGAATGTACACAAAACAACTGTTGCTTGGGTTGGAGTATCTTCATAAAAATGCAATTATGCACAGGGACATTAAGGGGGCAAACATTCTTGTAGATAATAAAGGGTGCATCAAGCTTGCTGACTTCGGTGCATCCAAGAAAGTTGTTGAGCTGGCTACTATTTCAGGTGCCAAGTCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTCATTCTTCAGACTGGGCATAACTCCTCTGCCGATATTTGGAGTGTTGGATGTACTGTTATCGAGATGGCTACTGGAAAGCCGCCTTGGAGCCAACAATATCAAGAGGTTGCTGCTCTGTTTCATATTGGGACAACAAAGTCTCATCCACCAATCCCTGAGCATCTCTCTGTGGAGGCAAAGGATTTTCTGTTGAAGTGTTTACAAAAGGAACCAAACTTGAGGCCAGCTGCATCTGAATTGTTGCAGCATCCCTTTGTTACTGGGGAATATCAGGAAACTCATCCAGTATTTCGCACTTCAGCTATGGCAAATTCTGGAAGCCTGTTGCCAACATCTGGATCAAACCTCAAGAACTCTATTAATCCTGAGGCCAGACCTAGGACAGCCTGCACCAGCTTGAAGGATGTTTGTAATGTGGGTAGTGTGAGGTGCTCAACTATATATCCTGAGAAGTTCTCAGAAATTGGGCCAGTTTGGGTAACTTCCACCAGTGATGATGACATGTGTCAGATAGATGACAAAGATGATTTTGTGTTGGGTGGTTCTGTTTTAATGTCGGATGACCTTAATAAGAGTTTTAATCCTATGTGCGAGCCCTCCGATGACTGGCCGTGCAAGTTTGATGAAAGTCTAGAACCAGAACAGAGGGGAATGAACTTGGACTTTGGTCAACCAGTTAACTGTGCTGCTGGCTTCCCTGGAACATCTGGGAAGGGGGAAAATGACTTCACATTTCCGTGTGGGCCATCAGTATCTGAGGATGACGATGAAGTTACTGAGTTGAAAATTATAGCCTTCCTGGATGAGAAGGCTTTGGAGCTGAAGAAGCTGCAAACACCACTGTATGAAGAGTTCTACAACACTTTGAATGGGGCTAGTCCTCTGAGCGTTGTCAGGAACATACACGATGAAAATGCTACGAACTATTTGAAGTTACCTCCCAAAAGTAGGTCACCCAGCCGGATTGCAGGTGTCGATTCTGTGAATACTGCAAGCCCTGGGAATTGTAGCAGGCGTGTATCGAATGTTGGTGGTGTAAACAATCAAACTTTGCAGGAAATTCCTTCGCCGCAGCTTAATGAATGGGGAGGGCATCTTGATTCTCAGCAACAACCAGTCAGCCCAAGTGCAAGCTTTTCTGAGAGACAGAGGAAGTGGAAAGAAGAGCTTGACCAAGAGCTCGAGAGAAAACGAGAGATGATGCGCCAGGCAGGTGTAGGAGGCAAGACATCATCTCCAAAGGATCGAGCTTTTAATCGGCAGAGAGAGCGGTTACAATTTGCATCACCAGGAAAATGA 2031 0.4682 MIQDIFGSVRRSLVFRSADGGDEGGGLAEKIGSCIRKSRVGIFSRPSPPALPPPPPPIPKDNTPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVSIAVNNASKEKAQAHIRELEEEVKLLKNLSHPNIVRYLGTAREEGTLNILLEFVPGGSISSLLGKFGSFPEAVIRMYTKQLLLGLEYLHKNAIMHRDIKGANILVDNKGCIKLADFGASKKVVELATISGAKSMKGTPYWMAPEVILQTGHNSSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEHLSVEAKDFLLKCLQKEPNLRPAASELLQHPFVTGEYQETHPVFRTSAMANSGSLLPTSGSNLKNSINPEARPRTACTSLKDVCNVGSVRCSTIYPEKFSEIGPVWVTSTSDDDMCQIDDKDDFVLGGSVLMSDDLNKSFNPMCEPSDDWPCKFDESLEPEQRGMNLDFGQPVNCAAGFPGTSGKGENDFTFPCGPSVSEDDDEVTELKIIAFLDEKALELKKLQTPLYEEFYNTLNGASPLSVVRNIHDENATNYLKLPPKSRSPSRIAGVDSVNTASPGNCSRRVSNVGGVNNQTLQEIPSPQLNEWGGHLDSQQQPVSPSASFSERQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRAFNRQRERLQFASPGK* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00827 676 FunFam Mitogen-activated protein kinase kinase kinase 2 67 359 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 625 647 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 557 582 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 600 624 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 46 63 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 566 582 - -
Eupl12g00827 676 Gene3D Transferase(Phosphotransferase) domain 1 67 353 - -
Eupl12g00827 676 Pfam Protein kinase domain 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00827 676 MobiDBLite consensus disorder prediction 44 63 - -
Eupl12g00827 676 CDD STKc_MAPKKK 67 330 - -
Eupl12g00827 676 SUPERFAMILY Protein kinase-like (PK-like) 67 371 IPR011009 -
Eupl12g00827 676 Coils Coil 627 647 - -
Eupl12g00827 676 FunFam Serine/threonine-protein kinase STE11 64 158 - -
Eupl12g00827 676 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Eupl12g00827 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Eupl12g00827 676 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 63 343 - -
Eupl12g00827 676 MobiDBLite consensus disorder prediction 600 676 - -
Eupl12g00827 676 SMART serkin_6 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00827 676 ProSiteProfiles Protein kinase domain profile. 68 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00827 676 Coils Coil 101 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00827 Eupl-Chr12 24070113 24078821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00827 2 654 MAP Kinase Kinase Kinase AT3G06030 60.479 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl12g00827 Pkinase 4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00827 K20606 - ming:122062637 1028.85