Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00824 ATGGCGACGGCGATGGTGGAGGGTATCGTGGGTCTTCTCCTCCTTATGTTTCTTCTGATCCTCCTCCTCTTCATCTTGGCCTGCAAGCCATGGCGTTTCTTCTTCACCTCCTCTCAATCATCACGCACGATCAAGGTTGGTGACCTAGAAAGGCCTCTTGTTTCTGAGGATTTGGATCAGATCCTGAGCCAACGCAATGAAGTGGCAAGAAATTATGTTTTAGAGGGGTCTCGTTCTCCACCTGAAGGGCATTTCAGCTCACCAAGAACACATGGGCTTGTTTTTAAACAGAGGCTTCCATCAGCAGATGCACATGCAGCCCAAGGTGCTAGTTTGGTTCTAGATGTAATTTCTGATCCTTCAGAGGATTTACTGGTTGGTCAAACACTTAAGCATCCATTATTGGAAAATCGCTTTGTTGAAGAGCGAAGACATGCTAGAAAGGAAGAACCAAATTGTGGCGCAACACTCCTTTCTGGCGATGGTAGTTATCGAGAGTCGGTGCCTAGGGATAGTACAGATCGAAGAAGCAGCCTGACCCTGGAAGTTATATCTGGTCCTTCTCGTGGGCTTCGTAGTTCCATACTGTCAACGAATACTTCTAGACTTCCATTGACCCTTGGAAGAGTTTCTCCGAGTGATCTATTGTTGAAGGATTCAGAGGTTTCAGGGAAGCACGCAATGATAAATTGGAATTTAAATAAATTGAAATGGGAGCTCGTGGATATGGGTAGCCTAAATGGAACACTCTTGAATTCTCAGACAGTCCACCATCCTGATTCCGGAAGTAGACATTGGAGTGAACCCATCGAGCTTGCCAGTAGAGACATAATAACTCTGGGCACAACGTCAAAAGTATTTGTTCAAATTACTCCCGTTTCTGAACACCAAATCCCCTTTGGAGTAGGTATGGCATCTGATCCCATGGCTTTGCGTCGAGGAGGAAAGAAGCTTCCCATGGAAGATGTGTGCTACTACCAATGGCCGCTTCCCGGAGTTGAACAGTTTGGGCTGTTTGGTATTTGTGATGGGCATGGTGGAGCGGAAGCTGCCAAAGCTGCTAGCAAAATTCTGCCCGAAATGGTTGCAAATATTTTGTCAGTTTCAGAAAAAAGAGAGAGGGTTCTTTCCCTATGTGATGCTTCAGATGTTCTTAAGGATGCATTTTCTCACACGGAGGCAGCTATGTATCATCAGTATGAGGGTTGTACTGCAACGGTGCTTTTGGTTTGGGCTGATGGTCATGAAGAATTCTTTGCACAATGTGCAAATGTTGGGGATTCAGCTTGTGTTATGAATATTGGTGGGAAACAAATCAAGATGACAGAGGACCACAGAGTAACTAGTCAGTCTGAAAGTATCCGCTTGAAAGAAACAGGAGAACCATTGAAAGATGGTGAAACACGACTATGTGGTTTGAACCTTGCCCGGATGCTCGGAGACAAATTTCTGAAAGAACAGGATGCCCGCTTCAGTTCGGAGCCTTACGTAAGCCAAGTTGTGCATATAGATAGAACAAGCAAGGCCTTTGCACTACTGGCAAGTGATGGCTTATGGGATGTCCTAAGTGTGAAGAAGGCAGTGCAGCTTGTCCTTCAGGTATGTAACTCGGTGCTTCTTGTTCAGTCCTGTGATCTGCTTAAGGTGTCTTTGACAGTTTTCTTATGTGTGGGATCTGCACAGACAAGGGAGAGATATGCTTCAGATAAAGGTAATTTGGCAGAGAAGATCGCCAATTTCGTGTTGAGTGAAGCAAGAACTCTGCGAACAAAGGATAACACATCGATAATTTTCTTGGATTTCGATAACACCTCTAGAACTGATTCTTGTAAAGTTGATTCTTAA 1845 0.4482 MATAMVEGIVGLLLLMFLLILLLFILACKPWRFFFTSSQSSRTIKVGDLERPLVSEDLDQILSQRNEVARNYVLEGSRSPPEGHFSSPRTHGLVFKQRLPSADAHAAQGASLVLDVISDPSEDLLVGQTLKHPLLENRFVEERRHARKEEPNCGATLLSGDGSYRESVPRDSTDRRSSLTLEVISGPSRGLRSSILSTNTSRLPLTLGRVSPSDLLLKDSEVSGKHAMINWNLNKLKWELVDMGSLNGTLLNSQTVHHPDSGSRHWSEPIELASRDIITLGTTSKVFVQITPVSEHQIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGVEQFGLFGICDGHGGAEAAKAASKILPEMVANILSVSEKRERVLSLCDASDVLKDAFSHTEAAMYHQYEGCTATVLLVWADGHEEFFAQCANVGDSACVMNIGGKQIKMTEDHRVTSQSESIRLKETGEPLKDGETRLCGLNLARMLGDKFLKEQDARFSSEPYVSQVVHIDRTSKAFALLASDGLWDVLSVKKAVQLVLQVCNSVLLVQSCDLLKVSLTVFLCVGSAQTRERYASDKGNLAEKIANFVLSEARTLRTKDNTSIIFLDFDNTSRTDSCKVDS* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00824 614 Gene3D - 173 309 - -
Eupl12g00824 614 FunFam Protein phosphatase 2C 70 174 308 - -
Eupl12g00824 614 Pfam Protein phosphatase 2C 312 536 IPR001932 -
Eupl12g00824 614 Pfam FHA domain 206 281 IPR000253 GO:0005515
Eupl12g00824 614 SUPERFAMILY PP2C-like 314 603 IPR036457 -
Eupl12g00824 614 Gene3D - 310 613 IPR036457 -
Eupl12g00824 614 ProSiteProfiles Forkhead-associated (FHA) domain profile. 205 256 IPR000253 GO:0005515
Eupl12g00824 614 SMART PP2C_4 295 599 IPR001932 -
Eupl12g00824 614 CDD FHA_PP2C70-like 179 288 - -
Eupl12g00824 614 FunFam Protein phosphatase 2C 70 309 545 - -
Eupl12g00824 614 SMART FHA_2 204 256 IPR000253 GO:0005515
Eupl12g00824 614 ProSitePatterns PPM-type phosphatase domain signature. 338 346 IPR000222 GO:0043169
Eupl12g00824 614 ProSiteProfiles PPM-type phosphatase domain profile. 301 601 IPR001932 -
Eupl12g00824 614 PANTHER PROTEIN PHOSPHATASE 2C 312 597 IPR015655 GO:0004722|GO:0006470
Eupl12g00824 614 SUPERFAMILY SMAD/FHA domain 178 288 IPR008984 GO:0005515
Eupl12g00824 614 CDD PP2Cc 313 601 IPR001932 -
Eupl12g00824 614 MobiDBLite consensus disorder prediction 145 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00824 Eupl-Chr12 24017217 24043313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00824 26 604 PP2C-type Phosphatase Gene Family AT5G19280 56.566 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00824 K01090 - nnu:104596472 835.869