Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00796 ATGGCTGAACCGGCATACACTGTGGCATCTGATAGCGAAACAACTGGAGAAGATAAACCATCATCTGTTTATCCTGAGATTGCAATTGGGATTGACATTGGAACTTCACAGTGTAGCATTGCATTATGGAATGGTTCCCATGTGGAACTCCTTAAGAACAGTAGGAACCAAAAGATGATGCGATCATATGTCACTTTCAAAAATGAAATCCCTTCTGGAGGAGTGAGCGGCCAACTTGCTCATGAGCATGAAATATTCTCGGGTTCTGCAATTTTCAACATGAAACGCTTAATTGGTAGAATGGACACTGACCCAGTGGTTCACGCTAGCAAAACCCTCCCCTTCCTGGTACAGACTTTGGACATTGGCGTCCGGCCGTTTATTGCTGCCCTAGTGAACAATGTTTGGAGATCCACCACTCCTGAAGAAGTCCTTGCAGTGTTTCTGGTGGAGTTGAGAGCCATGGCAGAAGTTCAACTAAAGAAACCAATACGGAACGTCGTCCTCACTATTCCAGTCGCGTTCAGTCGATTTCAACTAACACGGATTGAGCGAGCCTGTGCCATGGCAGGCCTACATGTCCTCAGGTTGATGCCTGAGCCAACAGCTGTAGCACTGCTATATGCACAACAACAGCAACAAACTGTACCTGAGAACACGGGAAGTGGAAGCGAGAAGATTGCACTTATTTTTAACATGGGTGCAGGTTATTGTGATGTTTGTGTAACCGCTACAGCCGGAGGAGTTTCACAAATCAAAGCCTTATCAGGCAGTGCCACTGGGGGAGAAGATATTCTTCAGAATGTCATGCATTATCTCTTGCCCAACTTGGACTCTTTTATCTCTCGTCATGGAATTAGTGAGATCAAATCAATGGGGTTGCTTAGGATTGCAACACAAGATGCCATCCACAAGCTATCCTCCCAAGAAGGTGTCACAGTAGAGGTTGATTTGGGAAATGGTTCAAAAATTAGTAGGGTTCTGGACCGGGTTGAATTCGAGGAGGTTAACCAAAAGGTTTTTGAGAAATGTGAGAGCCTCGTAATGCAGTGCTTGTACGACGCAAAAGTTGACGTGGAAGATATATGCGATGTCATACTTGTTGGCGGGTGTTCGAATATTCCCAAGATAAGAAGCCTGGTTTTGGGATTATGCAAAATGGAGTACCCATACACTGGGATGAACCCACTGGAAGCTGCAGTTTGTGGTGCTGCGCTGGAGGGAGCCGTGGCTTCAGGAGTCAGCGATCCATTAGGGAATCTGGACCTGTTGACCATACAAGTTAACCCACTGAGTCTTGGGATACGAGCTGATGGCAATAGTTTTGTGCCTATCATACCTCGGAATACCACGATGCCAGCGAGGAAAGAGTTATGGTTTACAACTGCACACGACAACCAAACTGAGGCGCTGATTGTTGTTTATGAAGGTGAAGGGAAGAAGGTGGAAGAGAACCATCTCTTGGGTTACTTCAAGATCATAGGGATACCCCCGGCACCAAAAGGGTCTCCAGAGATCAGTGTGTGCATGGACATTGATGCTTCAAACCTGCTGAGAGTATTTGCAGGGGCTATATTGCCTGGGACCCAACATACAGGGACGCCTTTCCTTGAAGTTAGGATGCCCACAGTGGACGACGGCCATGGCTGGTGTGCAGAAGCTCTGCTAAAGATGTATGGCTCCACTCTAGACTTAACCACTTTGCAGAAGAAGATACAGCAGTGA 1725 0.4672 MAEPAYTVASDSETTGEDKPSSVYPEIAIGIDIGTSQCSIALWNGSHVELLKNSRNQKMMRSYVTFKNEIPSGGVSGQLAHEHEIFSGSAIFNMKRLIGRMDTDPVVHASKTLPFLVQTLDIGVRPFIAALVNNVWRSTTPEEVLAVFLVELRAMAEVQLKKPIRNVVLTIPVAFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQTVPENTGSGSEKIALIFNMGAGYCDVCVTATAGGVSQIKALSGSATGGEDILQNVMHYLLPNLDSFISRHGISEIKSMGLLRIATQDAIHKLSSQEGVTVEVDLGNGSKISRVLDRVEFEEVNQKVFEKCESLVMQCLYDAKVDVEDICDVILVGGCSNIPKIRSLVLGLCKMEYPYTGMNPLEAAVCGAALEGAVASGVSDPLGNLDLLTIQVNPLSLGIRADGNSFVPIIPRNTTMPARKELWFTTAHDNQTEALIVVYEGEGKKVEENHLLGYFKIIGIPPAPKGSPEISVCMDIDASNLLRVFAGAILPGTQHTGTPFLEVRMPTVDDGHGWCAEALLKMYGSTLDLTTLQKKIQQ* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00796 574 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 362 378 - -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 394 414 - -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 503 519 - -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 167 187 - -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 422 441 - -
Eupl12g00796 574 PRINTS 70kDa heat shock protein signature 27 40 - -
Eupl12g00796 574 SUPERFAMILY Actin-like ATPase domain 27 210 IPR043129 -
Eupl12g00796 574 Gene3D Actin; Chain A, domain 4 262 343 - -
Eupl12g00796 574 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 419 534 IPR029047 -
Eupl12g00796 574 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 424 526 IPR029047 -
Eupl12g00796 574 PANTHER HEAT SHOCK PROTEIN 70KDA 28 522 IPR013126 GO:0005524|GO:0140662
Eupl12g00796 574 Gene3D - 213 391 - -
Eupl12g00796 574 FunFam Heat shock 70 kDa protein 8 262 343 - -
Eupl12g00796 574 FunFam Heat shock 70 kDa protein 8 92 147 - -
Eupl12g00796 574 MobiDBLite consensus disorder prediction 1 21 - -
Eupl12g00796 574 CDD HSP70_NBD 29 409 - -
Eupl12g00796 574 SUPERFAMILY Actin-like ATPase domain 224 410 IPR043129 -
Eupl12g00796 574 Gene3D - 92 147 - -
Eupl12g00796 574 Gene3D - 29 409 - -
Eupl12g00796 574 Pfam Hsp70 protein 28 523 IPR013126 GO:0005524|GO:0140662
Eupl12g00796 574 FunFam Heat shock 70 kDa protein 8 417 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00796 Eupl-Chr12 23609329 23619459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00796 28 522 Calmodulin-binding Proteins AT3G12580 36.255 1.45e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00796 K09489 - nnu:104596515 933.71