Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl12g00784 | ATGAAAGCGGGCGGGAGATCTGGTAATCCATCGGGGAGTATGGAGAAGGATAGGGCCCCTTTGGGCCGTTTAATTATTAGGAAAAAGGGGGATGGGACGAGCAGCGGGGGTCCTTCGGGGAAACAAAAGGTTTTTGAATCGAAGAAGGAGAAGAAGAGACCGCGGCTGATACTGAGTGATTCGGAGTCTGACAAGGACTTACTAATCTCTCCTCGCAGAATGGTTACAAGTCGCAATAGTAATGCCTCTGTTGTTGTTAAAAAGAACAGTCGAAATTCATTTAAACACAAAGAAGAGATTGAAATCAATAGGAAAAGAATTAGGTCAGAACCTGGTAAATGGGGGGAAGACGCCAAGAGCTGTAGGAGCAGTTTTGTGGAAGCTGGCATTGAAAGCAAGAGGAGTAGGTTGGATGTTTTTGAATACAACGAAGATGATGGAATTGATAGAAAAAGGATGAAGAAGGAGCGTCTGGATGATGATGGAGCTGGGATTGGAAGGAGTAAGGTTTTGGGTTCCAATTCCCTGGCACCAAGTGGAAATCAGAGGGAACTTGAAATTGAATGCAGCAGAAGCGTTTCGGTTGACAAGAGAAAGCATTCTAATTTTGGCAGGAACAGCAGCATGTTAGTTGAAAGAAACAGGGGAGCTGATCTTTCGGATAAGAAGAGGTTTGAGATTAAAAAAGATGCAAGTTTTCGTCCAGTTGGCACACTGCGAGAGAAGTTTGGGGTTCCTTGTGATGAACCTATCAGGGTGCAGGGTAAAAATGGTGTTTTGAAGGTGATGCTCAATAATAAGAACAGGGTTGGCGGGTCTGAGAAAACGTATGGTCGCCATGACGCAGAAGATAATAGAAAGGGTTCTATGTCTGCCAATACTTCCAACTGGAATGCACCGCTTCGTCCTCCATTTTTATCAGAAAAGAAGTTTTGTGAAAAACCATGCTCATTTGCAACAATGGAGAAGAATCAAGTGAAGTCGCGGAAAATTTCATCAAGTAAAAACATCAAAGCCCGTGATTGGAGAACAGAAGACAGTGATATGTCCTCGCCGCTGGGGTCAAAAAATGTGAGTACTTATAGTTTCAAGAAAGAGGTAAGGAACAAAGGAGAAAGAACTTTGACATCCAAACTTAGCTTGTCAACTAGACGCAAGAAAGGAGAAGTTAGGCGTGGTAGTGGCACTGAAAAGCAATTACTACGGGAACAGATAAGGGAGATGCTTGTGAATGCAGGCTGGACAATTGATTTTCGGCCTAGGAGGAACAGAAACTACCACGATGCGGTGTACATCAATCCTTCAGGAACAGAGCACTGGTCAATCCTCAAAGCTTATGATGCGCTTCAAAAGCAATGCGAAGATGAGGACAGTGACCATAAGCGTAGTGGGACCAGTTCTTCATTTACACCAATACCGGAAAAGGTCCTCAGTCAATTAACAAGGCAAACACGCAAGAAGATTGAGAGAGAAATGATGATGAAGCACAGAGCTGACAGAGGAAATAAAAACGCAAAGTCCACTGAAAAAAAGTCTGCAAAGAGTAAACATGTTAAAGAGAAATTGAATTCCCTCATCATGCGTGATGGCAAGTCACTGAAGGTGAGAATGAAGGAAAACAGTTTTGCCGGTCTAAACACGAAGAGCCTCACTAAAAGTCAGAAATCTACTCATCTTTCAAACAAAGCTGGTTCTGGAAATGGGGAATGTTTGCTTCACAAACAAAGTAGTTCAACTGGCACCTTGCACAAGGGAATGCCAAAGCCAGCTAGGGTTCAGAAGTCATTCTTTGCATCAGACGCTCGTTTGCTACAAAGAAGAAAACATAAAAAGCAAAGTGGATGTGCTTTGTTGGTTCGTAGCTCTAGCAAAGGGGTGAATCCGGACGATGGTGATTTTATTCCATACACTGGAAAACGAACTGTTCTCTCCTGGCTGATAGATTTGGGAATTGTGCCCCTGAGCGGGAAAGTGCAGTATATGAACAAGAGACGCACACGAGTAATGCTGGAGGGTTGGATTACAAGGGATGGCATTCATTGTGGTTGCTGTAGTAAAATCCTCACAATTTCGAAGTTCGAGATTCATGCAGGAAGCAAATTGCGTCAGCCGTTCCAAAATATATATCTAGAGACCGGGGTTTCCCTTTTCCAGTGCCAGCTAGACGCATGGAACGGACAAGAGGAATCTGAACGCAGTGAATTCCATTTCATAGACTTTGATGGTGATGACCCAAATGATGATACTTGTGGCATCTGTGGAGATGGCGGGGACTTGATTTGTTGCGATGGGTGTCCTTCAACGTTCCACCAAAGCTGCTTAGGTATACAGATGCTTCCTCTAGGTGATTGGCACTGTCCGAATTGTTCATGCAAATTTTGTGGGATAGCTGGTGCCAGTACTGATCAAGGGGAAAGTATAACTCTCTCTCCGTTACTCACATGCAGTCTGTGTGAGAAAAAGTATCACCAGTTATGTAGTCAGGCCACGGATGCTGTAAATTTTGATTCCAATAGCTTACACACTTACTTTTGTGGGCGGAGCTGTAGAGAGCTCTTCGAGCAATTGCAGAAGCTTCTCGGGGTTAAACATGAGCTGGAAGCGGGATTTTCATGGACTCTGGTTCAGCGTTCTGATTTAGACTCGGATACACATCTCCTTGGATTACCTCAAAAGGCAGAATGCAATTCCAAGCTAGCTGTTGCTCTGTCTGTTATGGATGAATGCTTTTTGCCCATTGTTGATCGGAGGAGTGGAATCAATTTGATTCACAATGTTGTATATAATTGTGGATCGAACTTTAATCGGCTGAATTATAGTGGCTTCTACACTTTTGTTTTGGAGAGGGGGGATGAACTTATCTCCGCAGCATCCATTAGGATCCATGGGACTAGGTTAGCAGAGATGCCATTCATCGGGACCCGCCATATTTATAGGCGTCAGGGAATGTGCCGGCGGCTTCTAAATGCAATTGAATCAGTTCTCTGCTCTCTCAATGTGGAGAAACTGATAATACCTGCTATTTCCGAACTCATGCACACATGGACTATAGTTTTTAATTTCAAGCTCCTTGAGGAATCACACAAGCACGAAATGAGGTCCATGAATATGTTAGTATTCCCTGGTACAGATCTGTTACAGAAGCTACTAGTGAAGCACAATTTGACTGAAGGAAATGTAGCCGATGGTTCAGTTGTGAAGGCCACTGAACTTAAAAGCAACCATCAGATTATGCCTGAGGTGATTAAGAAATCTGATATTGGTTCTTCTGCTGGGCCTGATGTCCATTCTTCTTATGAAGGTGTTGTCCCTCATGCATGTGAGGTGAATGATGAAGTTGCTGCAATCGAAACTGGTTCCCAACCTCCCGGTGGTTCGATATATGATACTTCTGACGTCATTGATGCTCATGAAGTTAATGTCAAAGTTGCTGGTGTTGAAATGGATGTCCATTCATCAGCTGAAACTTCTGTACAACAGACAACTAATACAATAGGCGAATATCCAAATGCTGTTTCTGGTTATAATTTTCAGGCTACTGATGGGAGTCCTGTTCAATGTAATACTGATTTGAATCATCAGAATATGCATGAGATGGAATGTAAATCGGTTGAGGCTTGTCATGTTGTGTCTGATGCAATTCATTGCAAAGAAACTATCCTTTGCGCATCCGATGAGGCTACGGGTCATGATGTTTGTGAGGTGAAAACTGAAGAAGTGGCTGATGAACCTGTCGTGTTTACTTCTGATGAGGGCTGTGTGCACCACTCTGCTGATATCATTACTCAAGTCCAGGATGCTGCTTTTGTGGTTGGTTTTCAAGGTTCTGGTGAGAATGTTGTATCTCATGATTCAGAGAGTATCAGTCAACCCCGGGGCACTGTATCTGAGTATAATTTTCACTTTTCTGCTGAAAGTGTAATTTATCATGATTTCAAGTTGCCGCAGAAGATCCAGGAATGTGCTCTTGATGCATCTGACACAGTGTGTAATACCCATGAAGTCAAAAATGAAGTTGCTGCTGTTGAATATAATCCTCAAGCTTTGGGCGAGGATTCTGTGGTCTGTACTTCTGAGGTGGTCAGTGAGCCTTTATATACTGCTTCCAAGTGTCATTATCTAGCATCTGCTGAGTGTAATAGTTTTGAGTCTCTATCCAATTGCTGTAACTCTTCGTCCGATATAGCTGTTCTCCCTGCTTACGAGGTAGTTCATCTCAGTACACACGATGTAGCAGATAACTGTTGTGTAGATATCACTGTTGACTCTGGCCTTAATGCTTCTGATCGGGGCAGCATGCTTGGCACTTGTGGAGTAGAAGTTGGAGTTGGTCCTAATCACCATACTTTTGGTCAAGCTTCTTTACATGATACCCTTGATTCTGTTCCTGAACCTAATTTCCTGGCTTCTGGTGGGAGTAATAGATTTTGTAATTCTGAGATGCTCCAGAAGAACCCAGATTTCACATCAGATCTTGTTCAAAATGTTTTTGCCTCTGCTGAGGGTAATGCTCATGATAATCATAGCCTAAAAGATGAAGTTCCTGGTGTTGAACCTATTGTACACGCCCTTGATGAGGATTCTATGCACAACACTTCCGAAATGATCATTAAATCGTTAGACACGACCCAGTCTGATTCTCAAGTTGCTCATTTGTGTCATCCAGTATAA | 4671 | 0.4312 | MKAGGRSGNPSGSMEKDRAPLGRLIIRKKGDGTSSGGPSGKQKVFESKKEKKRPRLILSDSESDKDLLISPRRMVTSRNSNASVVVKKNSRNSFKHKEEIEINRKRIRSEPGKWGEDAKSCRSSFVEAGIESKRSRLDVFEYNEDDGIDRKRMKKERLDDDGAGIGRSKVLGSNSLAPSGNQRELEIECSRSVSVDKRKHSNFGRNSSMLVERNRGADLSDKKRFEIKKDASFRPVGTLREKFGVPCDEPIRVQGKNGVLKVMLNNKNRVGGSEKTYGRHDAEDNRKGSMSANTSNWNAPLRPPFLSEKKFCEKPCSFATMEKNQVKSRKISSSKNIKARDWRTEDSDMSSPLGSKNVSTYSFKKEVRNKGERTLTSKLSLSTRRKKGEVRRGSGTEKQLLREQIREMLVNAGWTIDFRPRRNRNYHDAVYINPSGTEHWSILKAYDALQKQCEDEDSDHKRSGTSSSFTPIPEKVLSQLTRQTRKKIEREMMMKHRADRGNKNAKSTEKKSAKSKHVKEKLNSLIMRDGKSLKVRMKENSFAGLNTKSLTKSQKSTHLSNKAGSGNGECLLHKQSSSTGTLHKGMPKPARVQKSFFASDARLLQRRKHKKQSGCALLVRSSSKGVNPDDGDFIPYTGKRTVLSWLIDLGIVPLSGKVQYMNKRRTRVMLEGWITRDGIHCGCCSKILTISKFEIHAGSKLRQPFQNIYLETGVSLFQCQLDAWNGQEESERSEFHFIDFDGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLGIQMLPLGDWHCPNCSCKFCGIAGASTDQGESITLSPLLTCSLCEKKYHQLCSQATDAVNFDSNSLHTYFCGRSCRELFEQLQKLLGVKHELEAGFSWTLVQRSDLDSDTHLLGLPQKAECNSKLAVALSVMDECFLPIVDRRSGINLIHNVVYNCGSNFNRLNYSGFYTFVLERGDELISAASIRIHGTRLAEMPFIGTRHIYRRQGMCRRLLNAIESVLCSLNVEKLIIPAISELMHTWTIVFNFKLLEESHKHEMRSMNMLVFPGTDLLQKLLVKHNLTEGNVADGSVVKATELKSNHQIMPEVIKKSDIGSSAGPDVHSSYEGVVPHACEVNDEVAAIETGSQPPGGSIYDTSDVIDAHEVNVKVAGVEMDVHSSAETSVQQTTNTIGEYPNAVSGYNFQATDGSPVQCNTDLNHQNMHEMECKSVEACHVVSDAIHCKETILCASDEATGHDVCEVKTEEVADEPVVFTSDEGCVHHSADIITQVQDAAFVVGFQGSGENVVSHDSESISQPRGTVSEYNFHFSAESVIYHDFKLPQKIQECALDASDTVCNTHEVKNEVAAVEYNPQALGEDSVVCTSEVVSEPLYTASKCHYLASAECNSFESLSNCCNSSSDIAVLPAYEVVHLSTHDVADNCCVDITVDSGLNASDRGSMLGTCGVEVGVGPNHHTFGQASLHDTLDSVPEPNFLASGGSNRFCNSEMLQKNPDFTSDLVQNVFASAEGNAHDNHSLKDEVPGVEPIVHALDEDSMHNTSEMIIKSLDTTQSDSQVAHLCHPV* | 1557 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl12g00784 | 1556 | ProSiteProfiles | Zinc finger PHD-type profile. | 747 | 792 | IPR019787 | - | |
| Eupl12g00784 | 1556 | MobiDBLite | consensus disorder prediction | 271 | 300 | - | - | |
| Eupl12g00784 | 1556 | CDD | PHD2_CHD_II | 750 | 789 | - | - | |
| Eupl12g00784 | 1556 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
| Eupl12g00784 | 1556 | Pfam | Tify domain binding domain | 672 | 721 | IPR032308 | - | |
| Eupl12g00784 | 1556 | PANTHER | PHD FINGER PROTEIN 12 | 380 | 1227 | IPR042163 | GO:0003714|GO:0045892 | |
| Eupl12g00784 | 1556 | MobiDBLite | consensus disorder prediction | 273 | 287 | - | - | |
| Eupl12g00784 | 1556 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 740 | 802 | IPR013083 | - | |
| Eupl12g00784 | 1556 | SMART | PHD_3 | 791 | 850 | IPR001965 | - | |
| Eupl12g00784 | 1556 | SMART | PHD_3 | 749 | 790 | IPR001965 | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl12g00784 | - | - | ming:122090543 | 1298.11 |
Showing 1 to 1 of 1 entries