Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00775 ATGCCCGGCACTCTAGGCAAAAACCTCCATCTCTGCTTCTCAAAGCTCAAACGCCCCACAACAAGCCAGTCCCCTGCAACCCCACACACCGGAGAAGATCACAACCGTCCATCACCCACCACTACCCCTTCATCAATCTTGATGAAAAACTTCAACTCCATTTACGACCTCACATCCGACTCCACCTCCAAATCCGTCAGCCGCTCCAGCGACGATTTCTCATCGTCAGACTCCGACACCGAAACTACCCTTCCCGACTTTGCCTCCGTTTTCGCTTCTCAACGCTTCTTCTTCTCCTCTCCAGGTCGTTCCAACTCCATAATCGACTCATCAGAATACCCACCGGAATCTAACAAATTAGTCGGCGGAGGTGTCCCGATTCGGACCTACTCACCGGATCCCTACATGGATTTCCGGCGCTCAATGCAAGAGATGGTGGATGCGAGAGAGTTGTTAGATGTTAGAGCTGATTGGGATTACTTACACGAGTTGCTCCTGTGCTATCTTACGCTGAACCCTAAGCACACCCACAAGTTCATCCTCGGGGCTTTTGCAGATCTCCTCGTCTGTCTCATCTCATCGACATCTGACGGACGTCCCCGGTAA 606 0.5182 MPGTLGKNLHLCFSKLKRPTTSQSPATPHTGEDHNRPSPTTTPSSILMKNFNSIYDLTSDSTSKSVSRSSDDFSSSDSDTETTLPDFASVFASQRFFFSSPGRSNSIIDSSEYPPESNKLVGGGVPIRTYSPDPYMDFRRSMQEMVDARELLDVRADWDYLHELLLCYLTLNPKHTHKFILGAFADLLVCLISSTSDGRPR* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00775 201 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 40 192 IPR038933 GO:0045892
Eupl12g00775 201 ProSiteProfiles OVATE domain profile. 127 190 IPR006458 -
Eupl12g00775 201 MobiDBLite consensus disorder prediction 16 46 - -
Eupl12g00775 201 NCBIfam uncharacterized plant-specific domain TIGR01568 129 192 IPR006458 -
Eupl12g00775 201 MobiDBLite consensus disorder prediction 59 81 - -
Eupl12g00775 201 Pfam Transcriptional repressor, ovate 131 191 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00775 Eupl-Chr12 23315607 23316506 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl12g00775 Ovate 5.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00775 - - nnu:104611716 254.988