Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00731 ATGGAGGCCCAAAGGCCAAAGGAAGAATGGGAGATCGATTTGTCTAAATTGGATATGAGGAATGTTATAGCTCATGGGACTTATGGTACCGTATACCGAGGTGTTTACGATGGCCAAAATGTTGCAGTGAAGCTTTTGGATTGGGGAGAGGATGGGATCGCCACAACCGCTGAAACTGCTGCTCTTCGGGCATCATTTCGGCAAGAGGTTGCTGTTTGGCATAAGCTTGACAATCCAAACGTCACAAAGTTTGTTGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCTCTCCAAAATCCTTCAAGTGACGGTCGTGATTCCCTTCCTTCTAGAGCATGTTGTGTTGTTGTGGAGTACCTTCCGGGTGGGACACTAAAGCAATTCTTAATAAGAAATACACGAAAAAAACTTGCCTTTAAGATTGTTATTCAACTTGCTTTGGATCTCTCTAGAGGCTTTGGCATATGTTTATGGGAAATCTACTGCTGTGACATGCCATACCCTAATCTAAGCTTCGCTGAAGTCTCATCCGCAGTTGTTCGACAGAGTTTACGACCAGAAATCCCTAGATGTTGCCCGAGCTCATTCGCAAACATAATGCGAAAATGTTGGGATGCAAACGCGGAAAAACGCCCTGACATGGATGAGGTGGTGAGGTTGTTGGAGGCAATCGATACAAGCAAGGGAGGAGGCATGATACCTGATGACCAGAACTGCCCGAAACTCGCCGAATCTGCTTCTGCTATGGGATTCGAAAACTTTGTATCCTCGTCGATATTGTCAGATATCCTCCGACAGTCCGGCGGTTACGCCGTGATCGATGGGGGCCTCGCGACGGAGCTCGAACGACACGGTGCAGACCTCAACGACCCTCTCTGGAGCACCAAATGCCTCATTAGTACACCTCACCTCATCAGAAGGAGAATTTTGAAATTTTTACTAGTCATTTTATATGTGACACAGGCTACCATTCAGGGTTTTGAGTCTAAAGGCTACTCTAGAGAAGAAAGTGAAGCTTTGCTGAAAAAGAGCATTGAAATTGCACGAGAAGCGCGTGACATTTATTATGAGAGATGTGCAGATAGTTCAGATGATGGCACTGGAAATGGAAGAGCTCCCAAACAACGTCCGATCCTAGTTGCAGCTTCTGTAGGAAGCTATGGGGCTTATTTAGCTGATGGGTCCGAGTACAGGTTGGTTGACTCTGATTTTAGAGTAGTTGCCCCACTTACAGTTTTCTTTGGTTTGGATATGGTTTAG 1263 0.4561 MEAQRPKEEWEIDLSKLDMRNVIAHGTYGTVYRGVYDGQNVAVKLLDWGEDGIATTAETAALRASFRQEVAVWHKLDNPNVTKFVGASMGTSNLKIPLQNPSSDGRDSLPSRACCVVVEYLPGGTLKQFLIRNTRKKLAFKIVIQLALDLSRGFGICLWEIYCCDMPYPNLSFAEVSSAVVRQSLRPEIPRCCPSSFANIMRKCWDANAEKRPDMDEVVRLLEAIDTSKGGGMIPDDQNCPKLAESASAMGFENFVSSSILSDILRQSGGYAVIDGGLATELERHGADLNDPLWSTKCLISTPHLIRRRILKFLLVILYVTQATIQGFESKGYSREESEALLKKSIEIAREARDIYYERCADSSDDGTGNGRAPKQRPILVAASVGSYGAYLADGSEYRLVDSDFRVVAPLTVFFGLDMV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00731 420 SUPERFAMILY Homocysteine S-methyltransferase 268 403 IPR036589 -
Eupl12g00731 420 SUPERFAMILY Protein kinase-like (PK-like) 7 222 IPR011009 -
Eupl12g00731 420 Gene3D - 261 407 IPR036589 -
Eupl12g00731 420 Pfam Homocysteine S-methyltransferase 273 398 IPR003726 -
Eupl12g00731 420 Gene3D Transferase(Phosphotransferase) domain 1 153 232 - -
Eupl12g00731 420 FunFam Kinase suppressor of Ras 1 6 100 - -
Eupl12g00731 420 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 153 - -
Eupl12g00731 420 Gene3D Phosphorylase Kinase; domain 1 6 99 - -
Eupl12g00731 420 Pfam Protein tyrosine and serine/threonine kinase 18 153 IPR001245 GO:0004672|GO:0006468
Eupl12g00731 420 Pfam Protein tyrosine and serine/threonine kinase 154 222 IPR001245 GO:0004672|GO:0006468
Eupl12g00731 420 ProSiteProfiles Protein kinase domain profile. 17 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00731 Eupl-Chr12 22766544 22784535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00731 154 238 MAP Kinase Kinase Kinase AT3G22750 78.824 2.84e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl12g00731 S-methyl_trans 7.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00731 - - tcc:18603033 273.092