Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00726 ATGGATAATCCAGAGAGGAATCAGATTCGTACTCCGATTTCTGAATTCGAGGATTCTCATGTCTTTAATTATATCAACAGTCTTTCTCCTATTAAGCCCGTTAAGTCCACACACATTGCTCAGACGTTCAATGCGCTTAGTTTTGCATCCCTTCCATCTGTCTTTACTTTGCCACATGTCAGTTCCCAGAAAGAATCTAGGTTTTTAAGAAGGCATTACTTCTCAGACCTGTCAAACCCCGAGTTTTCTTCTGACATTGGAAATGAAGGCAATAGAAGTGCTGGGGTTTTGGATGCTATTCAGGTGTCCGATTGCTCAGCTGATCCGCAGGAAAGTTTTGATCCAGGGATTTCTATTACAGAGGTTTCTGTTGACCCACCTAATGACAGTTCAAAGCTTGCTATTGAGTTGCCGCGGACCTTGAAATATGATTGTGGTAGCCCCGATAGTAACCAGACTCTAGAGTTGCAGGGGATATGTCAGTTTGAGCAAGCTAAAGAAGGAACAGGATGTGATTGGGAGAATTTGGTTTCTGATGGTGCTGCTCTGTTAATTTTTGCTTCATCCACTGATGTGGAGGCTTCTGAGGTGCATGATCAGAAATTAGTGGATCCTGAGACTAGTCCCTTTACTTCTCTCTTGTCGAAGCTCCCACAATATAAAATTGATGATATGCAGAAAATACAACTGGTTGGTCAGATTGATTGTTGTGAACAACATGAAGCAGAAGTTCCTGCAACCCAACCAAGAGAACTTGGGGAGCAGAAGGAAACAGATCACACACCACAGATACTTTCAAGTACTTTTCACAATAAGGAAGAGGTTAATGATCCAGGCGAGAGAATGGATGACAAAAGTACTTTTCACAATAAGGAAGAGGTTAATGATCCAGGGGAGAGAATGGATGACAAAGCTGGAAATCACATTCCATTTGGTTACAAGCCTGACACTCAGCAGCAGCGTGGTATGCGAAGGCGCTGCCTAGTTTTTGAGATGGCAGGAGCTCATAAAAACAACTTAGAAGATGATTCTAATACTTCTTCAATCTCTTCACAATCTGACAGAAAATTTTCTTCTGATGATAAGCAATTGGTTCCTATCAAGCCTGGAATTTGTTCTTCACCATGTGTGCTACCTGGTATTGGTTTGCACTTGAATGCTCTTGCAGCTACCACAAAGGAATGTAGAGTTGTCAAGCATGAGACTCTGGCTTCTGGAAGGCAATTGATAAGCATGCCAAGTTCCATTTCTTCTTTTCATTTTCTAACATCTGAGCAAAAACCTTTAAATGAATGCTTGACTCAGAACTCTACAGATAAAGAGATGGGTTTAGCTGTCAGTGGAGTTCAGGTTATGCAAGATGCATGTCGATCTGCATTTGGAGTTAGTGAAGATTTTGATCAGAGTAGCCTCAAGAAGAAGAGACGCAGGTTGGAACATGCCGGAGAAAGTGAGGCCTGCAAACGCTGTAACTGTAAAAAGTCGAAATGCTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGATGTACTGTGTGGAGCCTTGCTCATGTCTGGAATGCTTTAATAAGCCTGTTCATGAAGATACTGTTTTGGCAACTCGCAAACAGATCGAATCTCGCAATCCACTCGCATTTGCTCCCAAAGTGATTAGGAACTCCGAGTCTGTTCCAGAAATTGGGGAAGAATCTAACAAAACCCCAGCTTCAGCTCGACATAAAAGAGGATGCAACTGCAAGAAATCAAGTTGCCTCAAGAAATACTGTGAATGCTATCAGGGTGGAGTTGGATGCTCGATTACCTGCAGATGTGAAGGGTGTAAGAATGCATTTGGTAGGAAAGACGAATCCACTCCAGTAGGAACAGAAGAAGCTCAACCAGAAGGGGAAGAAGCAGAAACCTGTGAAAAGAATGGGGAAGATAAACAATTACCGAACAATAAAATTGAGAGTGCTGAAGAGCAATATTCAGATCATGTTTTGCCTCTAACACCTTTCCAGATTTGCAGACCGTTGGTTCAACTGCTGTTTTCCTCCAGTGGGAAGCCCCTACAATCTTCTTTACTCTCTGTTGGATCATCTCCTCGGCTGCAGACCAGCCAAACACTTGAAAAATCAGATTCTCTGCAGCCTCATCCCAAGTTTGAGAAGCATTTCCAGATCATTCCAGAAGATGAAACCCCTGAGATTCTAAGAGGCAATTTCTCGTCTACCAGTGGCGTGAAGATTGCTTCTCCGAACTGTAAGAGGGTCTCACCTCCTCACAGTGAGTTTGGGTTGTCTCCTGGTCGTAGGATTAGCCGGAAATTGGTACTGCAATCTGTCCCTTCATTACCATCTCTCCCTCCTAACCAAGAAACCAGTAATTTTTCGGTGAAGTTTAAATGA 2385 0.4289 MDNPERNQIRTPISEFEDSHVFNYINSLSPIKPVKSTHIAQTFNALSFASLPSVFTLPHVSSQKESRFLRRHYFSDLSNPEFSSDIGNEGNRSAGVLDAIQVSDCSADPQESFDPGISITEVSVDPPNDSSKLAIELPRTLKYDCGSPDSNQTLELQGICQFEQAKEGTGCDWENLVSDGAALLIFASSTDVEASEVHDQKLVDPETSPFTSLLSKLPQYKIDDMQKIQLVGQIDCCEQHEAEVPATQPRELGEQKETDHTPQILSSTFHNKEEVNDPGERMDDKSTFHNKEEVNDPGERMDDKAGNHIPFGYKPDTQQQRGMRRRCLVFEMAGAHKNNLEDDSNTSSISSQSDRKFSSDDKQLVPIKPGICSSPCVLPGIGLHLNALAATTKECRVVKHETLASGRQLISMPSSISSFHFLTSEQKPLNECLTQNSTDKEMGLAVSGVQVMQDACRSAFGVSEDFDQSSLKKKRRRLEHAGESEACKRCNCKKSKCLKLYCECFAAGMYCVEPCSCLECFNKPVHEDTVLATRKQIESRNPLAFAPKVIRNSESVPEIGEESNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSITCRCEGCKNAFGRKDESTPVGTEEAQPEGEEAETCEKNGEDKQLPNNKIESAEEQYSDHVLPLTPFQICRPLVQLLFSSSGKPLQSSLLSVGSSPRLQTSQTLEKSDSLQPHPKFEKHFQIIPEDETPEILRGNFSSTSGVKIASPNCKRVSPPHSEFGLSPGRRISRKLVLQSVPSLPSLPPNQETSNFSVKFK* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00726 794 MobiDBLite consensus disorder prediction 687 707 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 614 644 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 338 361 - -
Eupl12g00726 794 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 785 IPR044522 GO:0003700
Eupl12g00726 794 MobiDBLite consensus disorder prediction 273 309 - -
Eupl12g00726 794 ProSiteProfiles CRC domain profile. 486 611 IPR005172 -
Eupl12g00726 794 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 574 609 IPR005172 -
Eupl12g00726 794 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 488 523 IPR005172 -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 244 258 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 244 322 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 775 794 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 339 354 - -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 630 644 - -
Eupl12g00726 794 SMART CXC_2 485 526 IPR033467 -
Eupl12g00726 794 SMART CXC_2 571 612 IPR033467 -
Eupl12g00726 794 MobiDBLite consensus disorder prediction 687 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00726 Eupl-Chr12 22722716 22731681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00726 304 782 CPP Transcription Factor Family AT4G14770 49.184 2.43e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Eupl12g00726 TCR 2.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00726 - - nnu:104598646 1018.84