Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00724 ATGGCGGTCGGAAAGAACAAGAGAATCTCGAAGGGGAAGAAGGGTGGAAAGAAGAAGGCGGTTGATCCTTTTGCTAAGAAGGATTGGTATGATATCAAGGCTCCTTCGATCTTCAACGTAAGAAATGTTGGGAAGACCCTTGTTAGTAGAACTCAGGGAACCAAGATTGCTTCGGAAGGACTCAAGCACCGAGTATTTGAGACTTCCCTGGCTGATCTTCAGGCCGATGAAGATCAATCTTACAGGAAAATCCGACTGAGAGCAGAGGATGTCCAAGGAAGGAATGTTCTCACTAACTTTTGGGGAATGGATTTCACGACAGACAAGTTGAGATCCCTAGTGCGTAAGTGGCAGACGTTGATTGAGGCACATGTGGATGTGAAGACAACTGACAACTATGGTCTAAGAATGTTCTGCATCGGATTCACCAAGAGGCGTCCTAACCAAGTCAAGAGAACCTGCTATGCGCAATCCAGCCAGATCCGCCAGATTCGCCGCAAGATGAGGGAAATCATGGTAAACCAGGCAACATCTTGTGATCTGAAAGAGTTGGTACAAAAGTTCATCCCTGAGGTGATTGGGAAGGAGATCGAGAAGGCAACATCCAGCATTTATCCTCTACAGAATGTCTTCATTCGGAAAGTCAAGATCTTAAAGGCTCCAAAGTTTGATCTTGGCAAGTTGATGGAGGTTCATGGTGACTATTCTGAAGATGTCGGCGTGAAGATGGAGAGGCCGGCTGAGGAACCGGTAGCAGAGGCAGAGACCGAAGTTGTAGGGGCCTAG 786 0.472 MAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSIFNVRNVGKTLVSRTQGTKIASEGLKHRVFETSLADLQADEDQSYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYGLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVQKFIPEVIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKMERPAEEPVAEAETEVVGA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00724 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Eupl12g00724 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 253 - -
Eupl12g00724 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
Eupl12g00724 261 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Eupl12g00724 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00724 Eupl-Chr12 22693849 22699720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00724 1 261 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 85.115 6.51e-162 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00724 K02984 - msin:131249428 457.218