Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00718 ATGGATGGTAAAGAAGATTTCAGCGTGTTTAATGGAGTTCCTGACCAATTCCACCAATTCATAGTTTCAAGAACAGCTCTCCCTCTCCCTCTCCCTCTCAGTCTCCCTCTTCATATCTCTCATCCCCTCACCTTCTCCGGTCTCAACCCTGCAACTTCTAATCAAGTATTCCAGTCTCACCTTCTTAACCTGCACCACCAATCCTTGACGCACAACGATGAAGAAAAAGAAGAAGAGAGAATAGTTGGTGGAAGCGTAAACCTGGAAGGATCAGTGAGATCTATATCAGAAATGATAGATCCATGGACGAAAGAGGAAGTACTTGCACTGTTGAAGATCAGATCTAACTTGGGGAATGGACCTTCAGATTTCATCTGGGAACATGTTTCAAGGAAACTTGCAGAGAATGGATTCATAAGGAGTGCAGAGAAATGCAAGGAGAAATTTGAAGAGGAGAGCAAATATTACAACACTGGTACTTATGATAAGAATTACTGGTCTTTTAATGAGCTTGAAGCACCCTATAAAGGTGAAAACCCTAAGTTCATAGCTGAAAAGTTGGTAAAAAACAATGGAGAAGGAGGGAAGACGGGTCTAAATTTGGAAGGGGACTCAGGACATGAGACCCTAGAAAACCCACCTCTAGAAAACAATTATGTGGTGAAAAGTTCAAATAAAAAGAAGAGAAGAAGGTACCATAAACTTGAATTGCTCAAGGGTTTCTGTGAAGAAATGGTGAACAAGATCATAGTTCAACAAGAAGAAAGGCACATGAAGATTTTAGAGATGTGGAGAGGAGAGAGGAAGAAAGAGTTGCTAGAGAAGAAGCTTGGAAGAAGAAAGAGATGGCTAGGATTAACAAGGAGATTGAAATTATGGAACATCAGCATACCATTGCATGTGAAAGAGAGGCTACAATCATTGAGTTCTTGA 933 0.4062 MDGKEDFSVFNGVPDQFHQFIVSRTALPLPLPLSLPLHISHPLTFSGLNPATSNQVFQSHLLNLHHQSLTHNDEEKEEERIVGGSVNLEGSVRSISEMIDPWTKEEVLALLKIRSNLGNGPSDFIWEHVSRKLAENGFIRSAEKCKEKFEEESKYYNTGTYDKNYWSFNELEAPYKGENPKFIAEKLVKNNGEGGKTGLNLEGDSGHETLENPPLENNYVVKSSNKKKRRRYHKLELLKGFCEEMVNKIIVQQEERHMKILEMWRGERKKELLEKKLGRRKRWLGLTRRLKLWNISIPLHVKERLQSLSS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00718 310 Pfam Myb/SANT-like DNA-binding domain 100 158 IPR044822 -
Eupl12g00718 310 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Eupl12g00718 310 PANTHER FI21293P1 70 264 - -
Eupl12g00718 310 Gene3D - 102 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00718 Eupl-Chr12 22503662 22506198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00718 102 173 Trihelix Transcription Factor Family AT1G76880 48.810 2.09e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl12g00718 Myb_DNA-bind_4 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00718 - - nnu:104598654 253.832