Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00716 ATGGAGCAGTACGAGATACTGGAACAGATTGGGAAAGGGGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCATGAAAAGAAGAAGTATGTTTTGAAGAAGATTCGTCTTGCCCGCCAGACTGATAGGTGCCGTAGGTCTGCACACCAGGAGATGGAGCTTATTTCCAAAGTGCGAAACCCTTTTATAGTGGAGTACAAAGATTCTTGGGTAGAGAAGGGTTGTTATGTATGCATCATTATAGGTTACTGTGAGGGTGGAGACATGGCAGAAGCTGTAAAAAAAGCCAATGGTGTTCATTTCCCTGAAGAGAAGCTCTGTAAGTGGCTTGTTCAACTCCTAATGGCACTTGATTACTTGCACATGAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCCTGACTAAAGATCAAGACATACGACTAGGTGACTTTGGACTTGCGAAAATGCTGACTTCAGATGACCTTGCCTCCTCTGTTGTGGGAACACCCAGCTACATGTGTCCTGAGCTTCTTGCTGATATTCCTTATGGCTCTAAATCAGATATTTGGTCTTTAGGATGCTGTATATATGAAATGGCTGCTCACAGGCCCGCTTTTAAAGCCTTTGACATGCAAGCACTGATCAACAAAATAAACAAGTCTATAGTGGCGCCACTTCCAACCATGTATTCTGGTGCATTTCGGGGTCTCATTAAAAGCATGTTGCGGAAAAATCCAGAACTTAGACCAAGTGCTTCAGATCTGCTCAGGCATCCACACCTTCAGGCTTATGTTCTTAAGATCCATCTAAAATCTAATAGCCCTAGACGCAATACCTTACCGATAAACTGGTCTGAATCCAATTACTTAAAGAAAACTAGATTCTTGGAACCAGAAGATGTTCCTCTCTGCAAGGACAGAGAAAAAAGGCGATCATTCTGCAATGACAGGATCTTGAATCCAAGTATATCTGGAGCTGAACAAGACTCTCGTTGTTCTACTCAAAGAATCCATGAATTTTCAAATTACGTGAATCAAAGGCTAGCAGAATTATCAGTTGGCAGCACCCATGAAGTAGGTGTTGATAAAACGACAACTGCGAAGACTTCAAATATTTCCAAAACCCCAAGATTGACTCCAGCAAAGGCTTCTGCGACACCAAGGAGACGGACAGATCCATCAAAAATGGCCCACATTGGTTCAAATCGTGAATCGCTTCCAGCATCGTGCACTCCGGCAAATAAATCCATCCGGTCGATTCGCAGAGCTTCTCTGCCATTGCCTACTCCTACTAGAGCTGCAACACTGGAATCCCCGTGCAGGCCCAACATCAGTCTCCTACGCCGTATGAACTCTCCAGATGTCTCCGTAAATGCCCCACGAATTGACAGGATAGCTGAATTTCCATTGGCCTCATCTGAGGACCCCCTCTTTCCCATCCGTAGAACTTCATCAACATCTGCACAAGGCTCTTCTACCTCGCCACATTGTGTGGACCTCTCCATCACAAAGGATAAGTGTACAGTCCAGATTCACGACAGAGCCTTTGCCAGGCCAAGCTTCACCGATGCTTGGCATGGGATTCAGCATGGCACTTTTCGCATGGATTGGGAGGATGGAAGTGAATGTTCTGACCGAAATCCAACAGCTGGGGCTGCAATTCGTGGCTTATCTGATTTGAGGCAGCGGCGGTTCGACACCTCGTCGTACCAGCAACGGGCTGAGGCCTTGGAAGGGTTGCTTGAGTTCAGTGCGCAGCTGCTACAGCAAGAGAGGTTTGAAGAGCTTGGAGTACTGTTGAAACCATTTGGACCTGGGAAGGTCTCTCCCAGGGAGACTGCTATTTGGCTGACTAAGAGCTTCAAGGAGACTACAGTCAAGCAGGAAGACTAA 1884 0.4575 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTDRCRRSAHQEMELISKVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAVKKANGVHFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAAHRPAFKAFDMQALINKINKSIVAPLPTMYSGAFRGLIKSMLRKNPELRPSASDLLRHPHLQAYVLKIHLKSNSPRRNTLPINWSESNYLKKTRFLEPEDVPLCKDREKRRSFCNDRILNPSISGAEQDSRCSTQRIHEFSNYVNQRLAELSVGSTHEVGVDKTTTAKTSNISKTPRLTPAKASATPRRRTDPSKMAHIGSNRESLPASCTPANKSIRSIRRASLPLPTPTRAATLESPCRPNISLLRRMNSPDVSVNAPRIDRIAEFPLASSEDPLFPIRRTSSTSAQGSSTSPHCVDLSITKDKCTVQIHDRAFARPSFTDAWHGIQHGTFRMDWEDGSECSDRNPTAGAAIRGLSDLRQRRFDTSSYQQRAEALEGLLEFSAQLLQQERFEELGVLLKPFGPGKVSPRETAIWLTKSFKETTVKQED* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00716 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Eupl12g00716 627 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 579 - -
Eupl12g00716 627 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Eupl12g00716 627 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Eupl12g00716 627 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Eupl12g00716 627 MobiDBLite consensus disorder prediction 357 377 - -
Eupl12g00716 627 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00716 627 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Eupl12g00716 627 Gene3D Transferase(Phosphotransferase) domain 1 84 275 - -
Eupl12g00716 627 CDD STKc_Nek 3 258 - -
Eupl12g00716 627 SUPERFAMILY Protein kinase-like (PK-like) 1 259 IPR011009 -
Eupl12g00716 627 MobiDBLite consensus disorder prediction 357 410 - -
Eupl12g00716 627 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00716 627 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00716 Eupl-Chr12 22449053 22461200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00716 10 259 MAP Kinase Kinase Kinase AT1G53570 32.549 3.96e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Eupl12g00716 Pkinase 6.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00716 K08857 - nnu:104598655 1015.76