Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00704 ATGAGACCGGGAGAGACGATTTTCCGGTCACCGCTCGACAAGCCCCTGGACCAGCTTACCGAAGACGACATTTCACAGCTCACTCGAGAAGATTGTCGGAGATACCTCAAAGAAAAAGGCATGCGTCGTCCCTCGTGGAACAAATCCCAGGCGATCCAGCAAGTCATCTCCCTCAAGACGCTGCTCGAATCGAGGACGGATTCTGACACCGCTGCCGGAATCCGGCAAAAAATCCCCGTCTCCGGCCCGGAAAATCCGCCTCGCGTCAGCTCAAACACTGTCACTTTAAGTTCAGAGAAAGTAACGAGCCCCGAATTCCAGATCTCGGTATCGGCGGACGAATCGGTTTCGTATCGGAGAAAAGATCCCCCGAAACCCGCTTTCTCCGGTGATGTGTCGTGTCGTCCCCCGGTGCCCGACAACACCACTTCTCCCAGAAACACGGGTGCAACGAATGGGCCAGTGAATCAGATGACTATTTTCTACGGCGGCAAGGTGAATGTTTACGATGGCATGCCAGCTGATAAGGCACAAGCGATCATGCAACTCGCAGCAAGACCTATCTATTTTCCTCAGGACACTCCCTCTGCTGGAACTGCAGCAGTTCGACCCTTTCCATGCCGATTACAAGTAGCGACCATCAGAACAGGAGCTGTGTCTCCCTCTGCTGGAGTCTCTCCAACCACACAAAATGTGCAGATAACTGAAAGTTCTCGGCAATACAGGGAAGAAGGAACACTATCTCGTGAAGTCGAACCTGAAGGTCCGACGAGCAGAAAAGCATCGTTACAAAGATACCTAGAAAAGCGAAAAGACAGGGGAAGATTTAAGATCAAGAGAAAAATAGGGGGATCATCTTCCTATAGCTTGGAGATGTACTTGAACCATCAAGTGAGGGGTCAGAACCCAAATGAGCAGTCAAGTGGGAGCGGCACATGCTCCCCACCCCGGCCCAGACCTCCTCTCACTCCCACCCGTTGCAGCTCAGTCGAGAAGCAGGCCAAGAACATTGGTCTCTCCGTTGATCTTAACAATGGTAAGGCACAAAGTCCCCTCTTTGACGCATATTTTATTCTTGGAAAATGGATACATAGTCCTATTTTTCAACAATTACATGCCCATTCAATCACTGGGTCACCTCATGATGGGTCTTAG 1155 0.5082 MRPGETIFRSPLDKPLDQLTEDDISQLTREDCRRYLKEKGMRRPSWNKSQAIQQVISLKTLLESRTDSDTAAGIRQKIPVSGPENPPRVSSNTVTLSSEKVTSPEFQISVSADESVSYRRKDPPKPAFSGDVSCRPPVPDNTTSPRNTGATNGPVNQMTIFYGGKVNVYDGMPADKAQAIMQLAARPIYFPQDTPSAGTAAVRPFPCRLQVATIRTGAVSPSAGVSPTTQNVQITESSRQYREEGTLSREVEPEGPTSRKASLQRYLEKRKDRGRFKIKRKIGGSSSYSLEMYLNHQVRGQNPNEQSSGSGTCSPPRPRPPLTPTRCSSVEKQAKNIGLSVDLNNGKAQSPLFDAYFILGKWIHSPIFQQLHAHSITGSPHDGS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00704 384 MobiDBLite consensus disorder prediction 300 327 - -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 220 262 - -
Eupl12g00704 384 Pfam tify domain 156 185 IPR010399 -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 242 256 - -
Eupl12g00704 384 SMART tify_2 151 186 IPR010399 -
Eupl12g00704 384 Pfam Jas motif 256 273 IPR018467 -
Eupl12g00704 384 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 288 IPR040390 -
Eupl12g00704 384 ProSiteProfiles Tify domain profile. 151 186 IPR010399 -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 220 241 - -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 85 100 - -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 136 153 - -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 112 153 - -
Eupl12g00704 384 MobiDBLite consensus disorder prediction 64 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00704 1 344 Tify Gene Family AT4G14720 43.553 1.52e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl12g00704 tify 1.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00704 - - nnu:104598663 439.499