Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00686 ATGCCTATAAGACAGATGAAAGAGAACTCAGAGCAGCACCTTGTGATCAAAACACAAACACAAACACAAAGCAGCATGAATCAAGTACAGAAGACACCAAAAACTGCTCAAAATGGCAAAGGCCCACCTTCTCAAGAACCCCAGAATGCTAAACTCCACCACCACAGTTCACCTCCTTCAAAAAACAGAGGTAGGAGGAGGGGTAGGGGAGGCCGAAAATCTGACCAAGGTGACGTTCTTATGCGCCCGAGTTCGAGACCCTGCACTGTAGTTCATAAGCCGGTTTCTGGGTACCCGGCTGAAGCTCCAAGTGGGTCTCTGGTCAATGGAGGTCATGTTTGTGAAATGGAGATGGGTTTTCCTTCATCTAGCAAATCTTTGAGGTTTGCCCCTAGGCCTGGTTATGGACAAGCAGGGACAAAGTGTATAGTAAAAGCCAACCATTTTTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTCACCATAACTCCTGAAGTGGTTTCAAGAACTGTGAACAGAGCTATAATGGCAGAGCTTGTAAAACTGTACAAAGTATCTGACTTGGGGATGAGATTGCCTGCCTATGATGGCAGAAAGAGCTTATACACAGCTGGGGAGCTTCCTTTCACTTCCAGGGAGTTCAATATTAAACTTTTGGATGAAGATGATGGAACCAATGGGCCCAAAAGAGAGAGGCAATATAAAGTGGTGATCAAGTTTGTTGCTCGAGCAGACTTGCACCATTTGGGCCAATTCCTAGCTGGTAAACGTGCGGATGCCCCCCAGGAGGCCCTTCAGATTCTTGACATTGTCCTAAGGGAACTATCGACCAAAAGGTACTGCCCTGTTGGGAGATCATTCTTTTCACCACATATAAGAACGCCACAGCGGCTTGGGGAGGGTTTGGAGTCATGGTGTGGATTCTACCAGAGTATAAGGCCTACTCAGATGGGCTTGTCCCTAAATATTGACATGTCTTCCGCAGCCTTCATTGAGCCTCTCCCTGTTATTGAGTTTGTTGCTCAGCTTCTAAGCAAGGATGTGTTGTCCAGGCAATTGTCTGATTCTGATCGTGTAAAGATCAAAAAGGCCCTTCGAGGAGTGAAAGTTGAAGTAACACATAGAGGAAATGTGCGACGAAAGTATCGGATTTCAGGATTAACATCACAGCCGACAAGAGAACTCGTGTTTCCTGTTGATGACCTCTTGAACATGAAGTCAGTTGTCGAATACTTTCAAGAGATGTATGGCTTCACCATCCAACATACACATCTTCCTTGTCTTCAAGTTGGGAACCAGAAGAAGGCAAACTATTTGCCAATGGAGGCCTGCAAAATTGTTGAGGGGCAACGGTATACGAAAAGGTTGAATGAAAGGCAAATCACCTCTCTCTTGAAAGTTACATGCCAGAGACCTAAGGATCGGGAAAATGACATTTTGCAGACGGTTCAGCATAATGCTTATGATCAAGACCCGTATGCAAAGGAGTTTGGGATCAAAATCAGCGAAAAGCTAGCTTCTGTTGAGGCTCGGATTCTTCCTGCTCCCTGGCTAAAATATCATGACACGGGGAAAGAAAAAGATTGTTTGCCTCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATCAATGGGAGCACTGTTAGCCGGTGGGCATGCATCAACTTCTCACGGAGTGTTCAAGAGAGTGTGGCTCGCGGGTTTTGTAATGAGCTGGCTCAAATGTGTCAAGTCTCTGGCATGGAATTCTATCCGGAGCCTGTTATTCCAATCTACACAGCCAGGCCTGATCAAGTAGATAAGGCTTTGAAACATGTTTATCATGCATCTATGAACAAGCACAAAGGCAAAGAGTTAGAGCTACTCTTAGCAATTTTACCTGACAACAATGGTTCTCTATATGGTGATCTCAAGCGGATATGTGAAACTGATCTGGGTATAATATCACAATGCTGTCTAACAAAGCATGTCTTCAAGATCAGCAAACAGTACCTGGCTAATGTGGCCCTAAAAATCAATGTTAAGATGGGAGGAAGAAACACTGTTCTTTTGGATGCTATCAGTTGGAGAATACCGTTGGTTAGTGACATACCGACCATAATTTTCGGAGCAGATGTGACCCACCCTGAGAACGGAGAAGACTCCAGCCCATCAATTGCTGCTGTAGTAGCTTCTCAGGACTGGCCAGAAGTCACAAAATATGCGGGACTGGTTTGTGCTCAAGCTCACAGACAGGAACTCATACAGGATTTGTACAAGACTTGGCATGATCCTGTACGTGGCACAGTTAGTGGTGGGATGATCCGGGATCTATTGGTTTCCTTTCGGAAGGCAACGGGACAAAAGCCACTAAGGATTATATTCTACAGGGATGGTGTGAGTGAAGGGCAGTTTTATCAAGTCCTACTCTATGAGTTAGATGCAATCAGGAGGGCTTGTGCTTCTCTAGAACCGAACTACCAACCGCCAGTGACTTTTGTTGTGGTCCAAAAACGGCATCACACAAGACTTTTTGCTAACAACCACAAAGATCGGAGTAGCATCGACAAGAGTGGGAACATTTTACCTGGGACGGTGGTCGACTCCAAAATCTGTCATCCAACGGAGTTTGATTTTTATCTCTGCAGCCACGCAGGGATTCAGGGGACGAGCCGGCCAGCTCATTACCATGTTCTATGGGATGAGAACAATTTTACACCAGATGGAATTCAGTCCTTGACGAACAACCTCTGTTATACGTATGCAAGGTGTACTCGCTCCGTCTCTGTCGTTCCTCCTGCATATTATGCACACCTAGCAGCATTTCGAGCTCGATTCTACTTGGAGCCAGACATGCAGGACAATGGCTCGATAGGCGGTGGTGCTGGTCAAGCATCAGCCCGGGCTACACGAGCTTCAGTGGAGTCAGGTGTCAGGCCATTGCCAGCCCTCAAGGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2979 0.4572 MPIRQMKENSEQHLVIKTQTQTQSSMNQVQKTPKTAQNGKGPPSQEPQNAKLHHHSSPPSKNRGRRRGRGGRKSDQGDVLMRPSSRPCTVVHKPVSGYPAEAPSGSLVNGGHVCEMEMGFPSSSKSLRFAPRPGYGQAGTKCIVKANHFFAELPDKDLNQYDVTITPEVVSRTVNRAIMAELVKLYKVSDLGMRLPAYDGRKSLYTAGELPFTSREFNIKLLDEDDGTNGPKRERQYKVVIKFVARADLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPVGRSFFSPHIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMSSAAFIEPLPVIEFVAQLLSKDVLSRQLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELVFPVDDLLNMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITSLLKVTCQRPKDRENDILQTVQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGSTVSRWACINFSRSVQESVARGFCNELAQMCQVSGMEFYPEPVIPIYTARPDQVDKALKHVYHASMNKHKGKELELLLAILPDNNGSLYGDLKRICETDLGIISQCCLTKHVFKISKQYLANVALKINVKMGGRNTVLLDAISWRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRRACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSIDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTPDGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPDMQDNGSIGGGAGQASARATRASVESGVRPLPALKENVKRVMFYC* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00686 992 MobiDBLite consensus disorder prediction 12 55 - -
Eupl12g00686 992 SUPERFAMILY PAZ domain 331 491 IPR036085 GO:0005515
Eupl12g00686 992 Pfam PAZ domain 359 467 IPR003100 GO:0005515
Eupl12g00686 992 ProSiteProfiles PAZ domain profile. 337 451 IPR003100 GO:0005515
Eupl12g00686 992 FunFam Argonaute 10 515 688 - -
Eupl12g00686 992 FunFam protein argonaute 10-like 694 992 - -
Eupl12g00686 992 MobiDBLite consensus disorder prediction 56 70 - -
Eupl12g00686 992 Pfam Argonaute linker 2 domain 477 523 IPR032472 -
Eupl12g00686 992 SMART DUF1785_2 284 336 IPR014811 -
Eupl12g00686 992 Pfam Argonaute linker 1 domain 285 334 IPR014811 -
Eupl12g00686 992 Gene3D - 694 992 IPR036397 GO:0003676
Eupl12g00686 992 SUPERFAMILY Ribonuclease H-like 613 947 IPR012337 -
Eupl12g00686 992 FunFam Protein argonaute-2 330 456 - -
Eupl12g00686 992 Pfam N-terminal domain of argonaute 141 275 IPR032474 -
Eupl12g00686 992 CDD Piwi_ago-like 495 945 IPR045246 -
Eupl12g00686 992 ProSiteProfiles Piwi domain profile. 625 946 IPR003165 GO:0003676
Eupl12g00686 992 Gene3D - 515 688 - -
Eupl12g00686 992 Pfam Piwi domain 626 944 IPR003165 GO:0003676
Eupl12g00686 992 CDD PAZ_argonaute_like 336 450 - -
Eupl12g00686 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 121 946 - -
Eupl12g00686 992 SMART Piwi_a_2 625 946 IPR003165 GO:0003676
Eupl12g00686 992 Pfam Mid domain of argonaute 534 611 IPR032473 -
Eupl12g00686 992 Gene3D paz domain 330 455 - -
Eupl12g00686 992 MobiDBLite consensus disorder prediction 1 89 - -
Eupl12g00686 992 SMART PAZ_2_a_3 341 473 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00686 Eupl-Chr12 21966985 21977430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00686 1 992 Eukaryotic Initiation Factors Gene Family AT5G43810 81.592 0.0 1649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00686 K11593 - nnu:104613234 1809.65