Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00657 ATGGCTAGTAACCCGCCGGAAGGACTAAACGACGATTTCCTTGAACAGATCTTAGCAATTCCTTCTTACGCGGGAAATGATACAGCTTTGGCGGGAAACGATGGGAATTTGGCCGGAACAGCGGCATCGATGATGTTGCAGCTGAGCTCCGGTGATGGTTCCAGTCATGTAACCGGAGGTGGTTTTCAGGGAAATGTTTTTCCGTTAGGGTTGAGCTTGGAGCAGGGAAAAGGTGGTTTTGTTAAACCAGATGAAGCGTCTGGGAGCGGTAAGCGGTTTCGAGAGGAAGTTGATGGGAAAGCTTCTTCCGGAAAGAACGATAGAGACTCCGTTCATTTGACGAGTTTGTTTCCGGCGTTTGGACATGTACAACCTCACTCGGTCCGGCCGTCCGCACCTCAGGTTCATCAGCCTTTCCATGGGCAGCCGACACCTGGCACAGTTTCGGTCGTGCCACACCCACCTAACATTCGCCCAAGAGTGCGGGCAAGAAGAGGACAAGCTACTGATCCACACAGTATTGCCGAGCGGTTACGTAGAGAAAGAATAGCAGAAAGAATGAAGGCTTTGCAGGAACTGGTTCCTAGCTCCAATAAGACGGATAGAGCAGCCATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAAGTCAAGGTTCTGAGCATGAGCAGACTGGGGGGCGCTGGTGCAGTGGCTCAGCTTGTAGCTGACATCCCACTTCCATCTGTTGAGATGCGTGCGACGTTTCCTGTTCTTGATATTTATCTCCTTGCTTTTTCTGTAATTAAGGGGGAAGCAAGCGAGGGTGGAAGCAATCAGCGAACGTGGGACAAGTGGTCCAGCGACGGCACAGAGCAACAAGTAGCAAAGCTCATGGAAGAAGATGTTGGGGCCGCCATGCAATTCCTTCAATCTAAGGCACTCTGCATCATGCCCATATCACTCGCCGCAGCAATCTACCATACACACCAACCTGACACCCCCTCGATCGTCAAGCCTGAATCGAACGCCCCTTCATAG 1029 0.5112 MASNPPEGLNDDFLEQILAIPSYAGNDTALAGNDGNLAGTAASMMLQLSSGDGSSHVTGGGFQGNVFPLGLSLEQGKGGFVKPDEASGSGKRFREEVDGKASSGKNDRDSVHLTSLFPAFGHVQPHSVRPSAPQVHQPFHGQPTPGTVSVVPHPPNIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADIPLPSVEMRATFPVLDIYLLAFSVIKGEASEGGSNQRTWDKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLAAAIYHTHQPDTPSIVKPESNAPS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00657 342 MobiDBLite consensus disorder prediction 79 110 - -
Eupl12g00657 342 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 320 - -
Eupl12g00657 342 MobiDBLite consensus disorder prediction 87 107 - -
Eupl12g00657 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 165 226 IPR036638 GO:0046983
Eupl12g00657 342 Gene3D - 162 224 IPR036638 GO:0046983
Eupl12g00657 342 FunFam Transcription factor bHLH66 164 229 - -
Eupl12g00657 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 216 IPR011598 GO:0046983
Eupl12g00657 342 SMART finulus 173 222 IPR011598 GO:0046983
Eupl12g00657 342 Pfam Helix-loop-helix DNA-binding domain 172 216 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00657 Eupl-Chr12 21361330 21368706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00657 62 341 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 59.507 1.33e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl12g00657 HLH 3.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00657 - - nnu:104589640 535.798