Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00632 ATGGTGGATCAGTTCTTGCTAGAGGAGTTGCAGAGAGAAATTCTCTGGCATGAGTCACGCCCCATGAATCAAAGCGCTTTTCTTCCATACACAAACCCCACCCAAGGATTCCGATCAATTGCAGTATCCAACCGGAACATGAACAACAGAATGGTCGAGTTCTTGAGAGCAATTCCAACCACGATTTATGAATACAGAGAGCCCGAGAAGGATCGGTGTTATCGACACATGATCAATGAGCGTTTAAGGCGTGAGAAGCAGAAGCAGAGCTTTGCCGCTCTTCATTCGATGTTGCCTCCTCCAACCAAGAATGATAAAAACTCGATTGTTCAAAAGGCAAGTTTGCATTTGCAAGAGATGCAGGTCCTGAAGGAAGAGTTGCAGAAGCAAAACCGCAAGCTTGAGGAGAATTTATCAGTGAGAGAAGGGGAGAAAGCAAATGTAGCTACAATTAGATTACGGGTAACCTACCCGTCTTCTGCTATCGATTCTATGCTTGGGGTTCTTAGATGCTTGAAGAGTATGGGATTGAAAGCAAGAACAATCCAATCAGAGTTTTCTCTTCAGGAATTTTCAGCGCTAATGGAGATCGAAACCCAGGTGGGTATGCAAGTTTTAACATTCATCCTTCATTGCTCCAGCAGTCTAAATTTTTGTCGCCGAATCCTAAATCCTTTCTCTTTTTCGTTTCTCAATCAGATTTCTTCTATGGGTATTCAAAAAATCCGCACTAGGAAAATGGTTTTTTTTTTTTAA 756 0.4233 MVDQFLLEELQREILWHESRPMNQSAFLPYTNPTQGFRSIAVSNRNMNNRMVEFLRAIPTTIYEYREPEKDRCYRHMINERLRREKQKQSFAALHSMLPPPTKNDKNSIVQKASLHLQEMQVLKEELQKQNRKLEENLSVREGEKANVATIRLRVTYPSSAIDSMLGVLRCLKSMGLKARTIQSEFSLQEFSALMEIETQVGMQVLTFILHCSSSLNFCRRILNPFSFSFLNQISSMGIQKIRTRKMVFFF* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00632 251 Coils Coil 110 144 - -
Eupl12g00632 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Eupl12g00632 251 Pfam Helix-loop-helix DNA-binding domain 73 121 IPR011598 GO:0046983
Eupl12g00632 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 136 IPR036638 GO:0046983
Eupl12g00632 251 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 20 201 IPR044658 -
Eupl12g00632 251 CDD bHLH_AtbHLH_like 76 128 IPR045239 -
Eupl12g00632 251 Gene3D - 71 148 IPR036638 GO:0046983
Eupl12g00632 251 SMART finulus 77 126 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00632 24 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 46.448 1.84e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl12g00632 HLH 8.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00632 - - nnu:104609539 201.83