Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00626 ATGGAGGAGGTTGAAGAAGCTAACAAAGCAGCTGTGGAGAGCTGCCATAGAATTCTTAGTCTCTTATCTCAGCCCCAAGACCAGATTCAGTGCAGAAACTTAATGGTGGAAACAGGGGAGGCTTTGTTCAAGTTCAAGAGAGTTGTTTCACTTCTGAATACTGGTTTGGGTCATGGTAGAGTCAGAAAAGTGAAGAAGTTTCCAGTTCAATCCCCCTTCCCCCAAAACATCTTCTTAGATAACCCAAATTCTAAAACAGATCCTTCAGCCAAGCCTCTCCAACTTCTCCAAACTAACCCAGTTGCAGAGATGGATGTAACAGCTAAGAATTCTATGCAACTTACCCAGAAAATATTGCTAGAAAACACAGCATTAGAAATGGCCTCAGTTGCTAAAAATCCTCTCCAACTTGCCCAACAAACACCACCAGCACACTATCAATTCCTACAACAGCAGCAACAAAGGTTTCAGCTTCAGCAGCAGCATCCGCATCAAATGAAATTCCAAGCCGATATGATGTATCGGAGGAGCAACAGCGGCATAAACCTCAAGTTTGATAGCCCCAGTTGCACACCCACCATGTCATCCACCAGATCTTTCATTTCATCTCTGAGCATGGATGGCAGTGTGGCTAACATGGATGGAAAGGCCTTTCATTTGATCGGGGCACCTCAGTCATCTGATTGGAACTCGCATCAAACTCCCAAGAGGAGGTGCTCTGGCAGGGGAGAAGATGGGAGTGTGAAATGTGCAAGTAGTGGTAGATGTCACTGCTCAAAGAGGAGGAAATTGAGGGTGAAGAGATCCATCAAGGTGCCTGCTATTAGTAACAAGCTTGCAGATATACCTCCCGATGAGTATTCATGGAGAAAGTATGGGCAGAAGCCAATCAAGGGTTCTCCACACCCTAGAGGATACTATAAATGTAGCAGCATGAGAGGTTGCCCAGCAAGGAAGCATGTCGAGAGGTGCTTGGAAGATCCCTCAATGCTTATCGTTACTTATGAAGGCGAGCACAACCACTCCAGGTTACTATCCCAATCTGCCCAGACATAG 1056 0.4574 MEEVEEANKAAVESCHRILSLLSQPQDQIQCRNLMVETGEALFKFKRVVSLLNTGLGHGRVRKVKKFPVQSPFPQNIFLDNPNSKTDPSAKPLQLLQTNPVAEMDVTAKNSMQLTQKILLENTALEMASVAKNPLQLAQQTPPAHYQFLQQQQQRFQLQQQHPHQMKFQADMMYRRSNSGINLKFDSPSCTPTMSSTRSFISSLSMDGSVANMDGKAFHLIGAPQSSDWNSHQTPKRRCSGRGEDGSVKCASSGRCHCSKRRKLRVKRSIKVPAISNKLADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHSRLLSQSAQT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00626 351 SUPERFAMILY WRKY DNA-binding domain 281 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl12g00626 351 Gene3D WRKY domain 269 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl12g00626 351 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl12g00626 351 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 349 IPR044810 GO:0003700
Eupl12g00626 351 FunFam WRKY transcription factor 65 267 344 - -
Eupl12g00626 351 Pfam Plant zinc cluster domain 236 281 IPR018872 -
Eupl12g00626 351 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl12g00626 351 MobiDBLite consensus disorder prediction 224 244 - -
Eupl12g00626 351 Pfam WRKY DNA -binding domain 285 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00626 Eupl-Chr12 20633696 20636416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00626 1 351 WRKY Transcription Factor Family AT2G30590 52.073 7.94e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl12g00626 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00626 - - ming:122066933 530.406