Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl12g00571 | ATGGAATCATCCCAGCACAAAGACTCGAAGAAATCGAACGAAGAAAGTGATCATCAGCAAGAGCAAGTCAACGATGTCGATGGTATCGGCCGCTCCTATGAATGTGTGTTTTGCAAGCGAGGCTTCACCACTGCACAAGCCTTGGGTGGACACATGAATATCCATAGGAGAGATAGAGCCAAGATTAGGCAGCCTTCGGCAATTCCTCCGGTTTCGAACCAATCCATCGAAGAATATGCGACACCTGCATATTTTCAGACAATTTCAAACCACCCACCATATTATTTTCCGGCGCACCAGACACCGATGGGTTATCAGATGTATGTACCACCATCCACATCTAGCACTAGACACCCACATCCATACTATGCCGATGATTTGCACATTCAAAAGTCGAGGTCTTTGAATTGGTTCAAGGAGGATCGGTGCATAAATTTAAGCTTGCAAATCGGTCCGACGCGTAAAGATGAGAAAGAAGAACAGCAGAGGCAAGATAAGGAAGAAGATGAACTGGATTTAGAGCTTCGACTGGGTCACGATCCCTAG | 546 | 0.4597 | MESSQHKDSKKSNEESDHQQEQVNDVDGIGRSYECVFCKRGFTTAQALGGHMNIHRRDRAKIRQPSAIPPVSNQSIEEYATPAYFQTISNHPPYYFPAHQTPMGYQMYVPPSTSSTRHPHPYYADDLHIQKSRSLNWFKEDRCINLSLQIGPTRKDEKEEQQRQDKEEDELDLELRLGHDP* | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl12g00571 | 181 | PANTHER | OS07G0101800 PROTEIN | 1 | 180 | - | - | |
Eupl12g00571 | 181 | SUPERFAMILY | beta-beta-alpha zinc fingers | 31 | 59 | IPR036236 | - | |
Eupl12g00571 | 181 | MobiDBLite | consensus disorder prediction | 150 | 181 | - | - | |
Eupl12g00571 | 181 | Gene3D | Classic Zinc Finger | 5 | 81 | - | - | |
Eupl12g00571 | 181 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 35 | 55 | IPR013087 | - | |
Eupl12g00571 | 181 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 33 | 60 | IPR013087 | - | |
Eupl12g00571 | 181 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Eupl12g00571 | 181 | Pfam | C2H2-type zinc finger | 33 | 57 | - | - | |
Eupl12g00571 | 181 | MobiDBLite | consensus disorder prediction | 152 | 181 | - | - | |
Eupl12g00571 | 181 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl12g00571 | Eupl-Chr12 | 19540786 | 19541708 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl12g00571 | 31 | 65 | C2H2 Transcription Factor Family | AT3G09290 | 80.000 | 8.87e-16 | 69.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Eupl12g00571 | zf-C2H2_6 | 2.1e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl12g00571 | - | - | tcc:18613190 | 154.066 |