Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00570 ATGTTAAAAGCAATACCTTTTTGGCTTTTGATTTCTTCTCTAATCTTATCGGTTTCTGCTGGGGACATTGAATTCTCCCGTTGTAATTGCGACGACGAAGGCGTCTGGAGCATCGAGAGTATTCTGGAATGCCAGAAAGTGAGTGATTTCCTTATTGCAATCGCCTACTTCTCGATCCCCATCGAGCTCCTTTACTTTGTTAGCTGCTCCAACGTCCCGTTCAAATGGGTCCTCTTTCAGTTCATCGCCTTCATAGTTCTTTGTGGATTGACCCATTTTCTCAATGGGTGGACTTATGCTCCGCACCCCTTCCAGCTGATGCTGGCCCTCACCATCTTCAAATTTCTAACTGCTCTGGTCTCGTGTGCAACTGCAATAACGCTCTTAACTCTCATCCCTCTGCTTCTCAAACTAAAGGTGAGAGAGCTGTTCTTGAAGAAGAAGACTTGGGAGCTTGATCGAGAGGTCGGGATAATGAAGAAACAGAAGGAAGCAAGCTGGCATGTCCGGATGCTGACCCACGAGATTAGGAAGTCGCTCGATCGGCATACTATCTTGTACACCACTATGGTTGAGCTATCCAAGACATTGGACCTACAGAACTGTGCGGTTTGGATGCCTAATGAGAGTCGGACAGAAATGAATCTGACTCACGAATTAAAAGAAAGGGGTTTGTCGAATTCCTACCGTAATCCAATCTCAATAAATGACCCAGATGTTGTGGAGATCAAGGGGAGCGAAGGAGTGAAGCTCCTGAGGCCAGACTCTGCCCTCGGGAGTGCGAGTAGTGGTGGAGCCAGCGAGCCAGGTGCTGTGGCTGCCATTCGAATGCCAATGCTGAGGGTGTCAAACTTCAAAGGGGGAACGCCAGAACTGATCCAGACATGTTATGCAATTCTGGTTTTGGTTCTCCCAAGGGTGGATGCTAGAGGTTGGAGCTATCAGGAACTGGAGATTGTCGAGGTGGTTGCTGATCAGGTGGCTGTGGCTCTATCCCATGCTGGAGTACTGGAAGAGTCTCAGCTGATGAGAGAGAAACTGGTGGAGCAGAACCGGGCATTGCAACAGGCTAGAAAAAATGCAATGATGGCGAGTCAGGCGAGGAACTCATTTCAGAAGGTGATGAGCCACGGTATGAGGAGGCCGATGTACTCGATCTCAGGCCTGCTTTCAATGATACAACAAGATAATATTGGCAGCGAACAGCGGATCATCATTGACACAATGGTAAAGACGAGCGGTGTCCTCTCAACCTTGATGAATGATGTGATGGAGATTTCAACTAAGGAGAACGGTAGGTTTCCATTGGAGATGAGATCTTTCCGGCTTCATTCCATGATAAAGGAAGCAGCTTGCATTGCCAAGTGCCTGTGTGTTTGTTGGGGTTTCAGTTTCTGTATTGAGATCGGTAACTCACTGCCTGATTGGGTGCTGGGTGATGAGAGAAGAATTTTTCAGGTCATACTGCATATGGTTGGGAATCTGTTAAATGGGTGTGATGGAGGCTCTGTAACTTTCCGGGTTTCCTCAGAGAGTGGAAGTGAGGGCGTGAATGATCAAAGATGGGCTATGTGGAGATCAAGTTCATCTGATGGATACGCTTATATAAAGTTTGAAATTGGGATTAACGATGGTGGTTCTCAACCAGAGGGCTTGACCTCCTCAATACAGCTTGCTAGTAGGAAACACAACATTGAGGGAATTGAGGAGCGCCTAGGCTTCAGCATGTGCAAAAAGCTCGTGCAGATGATGCAAGGGAACATCTGGGTGGTTCCCAACTCCCATGGCCTTGCACGAAGCATGACCCTCACCCTCAGATTTCAACTCCAACCATCTATAGGGGGTGGCATTTTTGAATCTGGAGGATCTTCAGAGCATCCACCTTCCAATTCTCTGTTCAAAGGTCTTAAAGTTTTATTAGCTGATGATGATGATGTCAACAGGCTTGTGACTCGTAAGCTACTTGAAAAGCTCGGTTGCCATGTCTCTCCTGTTTCGTCTGGGTTCGAATGTCTGAGTGCTCTGGGGCCCTCTGGAACTTCTTTCCAAATCATTCTTCTGGACCTCCAAATGCCAGAGATGGATGGGTTTGAAGTTGCAATGAGAATCCGAAAGTTCCATAGCCGGAGTTGGCCATTGATCGTAGCAATTACTGCTAGTGCTGACGAAGATGTGTGGGAAAGATGCCTGCAGACGGGAATGAATGGCGTCATTCGGAAACCAGTTCTGTTACAGGGAATTGCAGACGAACTTCGCAGAGTCCTGCAACAGGCAAACAAAGTTAAAATTTCGGCACAGAGTTGA 2304 0.474 MLKAIPFWLLISSLILSVSAGDIEFSRCNCDDEGVWSIESILECQKVSDFLIAIAYFSIPIELLYFVSCSNVPFKWVLFQFIAFIVLCGLTHFLNGWTYAPHPFQLMLALTIFKFLTALVSCATAITLLTLIPLLLKLKVRELFLKKKTWELDREVGIMKKQKEASWHVRMLTHEIRKSLDRHTILYTTMVELSKTLDLQNCAVWMPNESRTEMNLTHELKERGLSNSYRNPISINDPDVVEIKGSEGVKLLRPDSALGSASSGGASEPGAVAAIRMPMLRVSNFKGGTPELIQTCYAILVLVLPRVDARGWSYQELEIVEVVADQVAVALSHAGVLEESQLMREKLVEQNRALQQARKNAMMASQARNSFQKVMSHGMRRPMYSISGLLSMIQQDNIGSEQRIIIDTMVKTSGVLSTLMNDVMEISTKENGRFPLEMRSFRLHSMIKEAACIAKCLCVCWGFSFCIEIGNSLPDWVLGDERRIFQVILHMVGNLLNGCDGGSVTFRVSSESGSEGVNDQRWAMWRSSSSDGYAYIKFEIGINDGGSQPEGLTSSIQLASRKHNIEGIEERLGFSMCKKLVQMMQGNIWVVPNSHGLARSMTLTLRFQLQPSIGGGIFESGGSSEHPPSNSLFKGLKVLLADDDDVNRLVTRKLLEKLGCHVSPVSSGFECLSALGPSGTSFQIILLDLQMPEMDGFEVAMRIRKFHSRSWPLIVAITASADEDVWERCLQTGMNGVIRKPVLLQGIADELRRVLQQANKVKISAQS* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00570 767 Coils Coil 337 364 - -
Eupl12g00570 767 Gene3D - 433 611 IPR036890 -
Eupl12g00570 767 Pfam GAF domain 181 331 IPR003018 GO:0005515
Eupl12g00570 767 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 760 - -
Eupl12g00570 767 Pfam Response regulator receiver domain 638 745 IPR001789 GO:0000160
Eupl12g00570 767 CDD HATPase_ETR2_ERS2-EIN4-like 473 605 - -
Eupl12g00570 767 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 421 595 IPR036890 -
Eupl12g00570 767 CDD REC_ETR-like 636 751 - -
Eupl12g00570 767 Gene3D - 169 342 IPR029016 -
Eupl12g00570 767 FunFam Ethylene receptor 634 758 - -
Eupl12g00570 767 Gene3D - 353 432 - -
Eupl12g00570 767 CDD HisKA 365 427 IPR003661 GO:0000155|GO:0007165
Eupl12g00570 767 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Eupl12g00570 767 FunFam Ethylene receptor 4 334 428 - -
Eupl12g00570 767 SUPERFAMILY GAF domain-like 184 334 - -
Eupl12g00570 767 Gene3D - 636 766 - -
Eupl12g00570 767 ProSiteProfiles Histidine kinase domain profile. 374 607 IPR005467 -
Eupl12g00570 767 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Eupl12g00570 767 SMART gaf_1 181 341 IPR003018 GO:0005515
Eupl12g00570 767 SUPERFAMILY CheY-like 633 756 IPR011006 -
Eupl12g00570 767 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 608 IPR003594 -
Eupl12g00570 767 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 352 433 IPR036097 GO:0000155|GO:0007165
Eupl12g00570 767 SMART REC_2 636 755 IPR001789 GO:0000160
Eupl12g00570 767 PIRSF Ethylen_sen_hybr_HK 1 762 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00570 Eupl-Chr12 19504371 19509214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00570 20 760 Miscellaneous Gene Families AT3G04580 61.385 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl12g00570 GAF 4e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00570 K14509 - ming:122077347 1154.04