Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00569 ATGGCGAACCGGTGGTGGACTGGACAGGTGGGGCTGCCGGGGATCGAACCGGCAGCGGGTTCACTTGCGTTGAATAAACGCGATCAAGAAATTTCGATGAACAAAAGCAGCGGAAGCGGTGGAGGAGGCGATGATGAGGAGGAAAGAGAGAACGGTGACGAACCAAAAGAGGGTGCAGTTGAGGTGGGGACTCGTCGACCAAGGGGCCGGCCACCCGGATCAAAGAACAAGCCAAAACCACCGATCTTTGTGACCCGGGACAGCCCGAACGCGCTCCGAAGCCATGTCATGGAGGTGGCGAGTGGGGCCGATGTGGCGGAAAGCGTCGCCCAATTCGCCAGGAGGCGCCAACGAGGTGTCTATGTTCTCAGTGGGAGCGGTGCAGTGGCCAACGTAACACTGCGACAGCCTGCTGCTCCGGGTGCAGTTGTGGCACTACACGGCCGGTTCGAGATACTATCTCTAACTGGTGCGTTCCTGCCTGGACCGGCTCCGCCAGGCTCAACCGGGTTGACTGTCTACCTGGCGGGCGGTCAAGGGCAGGTGGTTGGTGGCAGCGTGGTTGGCACCCTTGTCGCAGCTGGTCCAGTCATGGTGATTGCCGCCACGTTTTCCAACGCAACATATGAGCGGTTGCCACTCGAGGACGATGATGATGCAGGCAGTGGTGGACAGGGACAGCTGATCGGCGGTACAGGAAACTCGCCGCCCGCAATTGGCAGCAGTGTAGGGCAGCAGCACCAGCCTTGTCTGCCCGACCCGTCATCGCTACCAGTTTATAATCTACCCCCCAACCTGCTCCCTAATGGAGAATTTGTTGGCAAGAAGGTGCGAATCCCAACAATGGCTGCTATAACCCAAGGTTATATTCCGTTCACTTACTTGGGAGCCCCTCAAAGTGGATGA 906 0.585 MANRWWTGQVGLPGIEPAAGSLALNKRDQEISMNKSSGSGGGGDDEEERENGDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVASGADVAESVAQFARRRQRGVYVLSGSGAVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGTLVAAGPVMVIAATFSNATYERLPLEDDDDAGSGGQGQLIGGTGNSPPAIGSSVGQQHQPCLPDPSSLPVYNLPPNLLPNGEFVGKKVRIPTMAAITQGYIPFTYLGAPQSG* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00569 301 ProSiteProfiles PPC domain profile profile. 89 228 IPR005175 -
Eupl12g00569 301 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Eupl12g00569 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Eupl12g00569 301 CDD DUF296 93 176 IPR005175 -
Eupl12g00569 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 217 - -
Eupl12g00569 301 MobiDBLite consensus disorder prediction 213 255 - -
Eupl12g00569 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 37 267 IPR014476 GO:0003680
Eupl12g00569 301 MobiDBLite consensus disorder prediction 1 89 - -
Eupl12g00569 301 Gene3D - 92 219 - -
Eupl12g00569 301 MobiDBLite consensus disorder prediction 227 252 - -
Eupl12g00569 301 PIRSF ESCAROLA 15 291 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00569 Eupl-Chr12 19468168 19473263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00569 1 270 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.766 2.28e-97 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00569 - - nnu:104610098 390.578