Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00556 ATGGGTACTAACTTGCAGCAAACTCTCAGAAGCCTCTGTTTCAAGACAGAGTGGAAATACGCTGTCTTTTGGAAGCTAAAGCTTCGAGCTCGCATGTTGTTGACTTGGGAGGATGCTTATTACAAAAACCATGAACCACTTGATCATTCAGAGAATATGAGCTTTAATGATACCCTTGAGAACTTGCATGATGGACGTTATCTACAGGATCCGCTTGGCATGGCTGTGGCAAAGATGTCATATCTTGTATATTCTCTAGGGGAAGGGATTATTGGACAAGTTGCAGTTACTGGAAAACATCAGTGGATTTTTGCAGACAAGGCTGCATCCTGTTCCTGGTCATCATCCGAGTACTGTGACGGGTGGCAAGCTCAGTTTTTAGCTGGGATTAGGACTATTGCTGTTGTATCTGTTGTTCCATATGGAGTTGTACAACTCGGATCTTTAAATACGGTCATTGAGGATATGAAGCTGGTGACCCACATCAAGGATGCATTTCACTCACTTCAAAATTCCTCTGTAGAATTTCTTCCTAGTCCAGTACATTATATTGTGGAGAGCAACTCATGTTCGAGATCAGATAAAGCTATAAACAACAAAAAGCCAGATATTCAATCTCACTTGTCGTCGTCTCCTGGAAAATGCAATGAATTATCCCAAGATGTTTTTCCACTGCCTGGTCCCCATAAGAAAAATGCGGTTGAAGTGGTCTGTGGACATGCTGGAATTGAATCACCAACAATAAGGGATAATGGAAGTGCTGAGTTACTTCAACCAAAATCTGGATTCTTCACTCTGGAGCATCAGAATGAGGTACAGATGAAAGTGATTAATAACAAAAGGTTTGGGGAGGAGAATAGTGGCTGGCAGGATATGTTGGAAGGATCGAAGCACAATGATGCCCCAGCTTCATGCAATTTTCCTGCAGAGAGTGCAAATTTGAATAATTTTACTCTGCCAGTTGACAAGTCTGGATTAGATTATCCTTTCTTGCCTTTGGACCTACTTGACTCTGCTGTTTGGGATAGAGTAGTTTATCTTCAAAATGAGGAGATTCACTCACCTGAACCATTGGAGACTCAGCTAGGAAAAGGCTTGGTACAGAAACCAGAGTTATGGCCCAAGTCAAGTCACCCTGACACTGTGAACAATTCCTTCATGTTTTCTGCTGGCTGTGAGCTGCACGAAGCCCTTGGATCAGCTTTTAAGAAAGAGCAAGATTCTTGTGCTTGGAGCGAGTCAGAGAGGACAGAAAGTGGATTGCTTTTTGAGCCCCCAGAAGGGATGATCAGTACCTGGTTTTCAACAGAATGTGGGTCAGATCTTCTAGAAGCAGTGGTGGCAAATGCTTGTCCGGGTTCTAGCAATGTTAAAAGTGAGAGTTCATTGTGTAATTCAGAGCAATCACTATTGACAACTGAAAAACCCCCACATAAGCATGGTACTGGTCCAGCAGGTGGATCAGTTGTCAAGTCCTCTCTCCTTGTGGAAGATGATGCACATCACCACTTAAATTCAATTTGGGAATCAACTGGAGTAGGTGTTGTAAGGTCTCCAAAGGAGTCATCGCCAAAGACTCTGAGTACATGTAGTGAGCAATTGGAAATGCGGGTGGAACCAGCTAGGATCAACAGGAAAAGGGCTAGGCCTGGTGAAAGTTGTAGGCCTAGGCCGAGGGACAGACAGCTGATCCAAGATCGTGTTAAGGAGCTGCGAGAGCTTGTGCCCAATGGGTCAAAGTGCAGTATTGATGCACTACTGGAGCATACGGTCAAGCACATGCTCTTTCTACAAAGTGTTACTAAGCATGCTGACAAGCTAAGGAAATGTGGTGAATTAAAGGAAATGGGCTTACTGGGATCCTGCAGTCGTGAACATGGTTCAAGTTGGGCTCTAGAGGTGGGAAGTCAGACAAAAGTTTGTCCAATAATAGTTGAGAATCTTAACATGAACGGACAGATGCTTATTAAGATATTGTGCGAGGGATGCAACCATTTTCTTGAGGTAGCTGAGGCTATCAGAGGCTTGGGTCTAATGATTTTAAAAGGTTTAATGGAAGCCCGTGGTGAGAAGTCATGTGCATGCTTTGTTGTCGAGGGGCAGAATAACAGAGGCTTGCGTAGGATGGATATCTTATTGTCGCTTATGCAGTTATTGCAACCGAAGACTACAATCTGA 2178 0.4366 MGTNLQQTLRSLCFKTEWKYAVFWKLKLRARMLLTWEDAYYKNHEPLDHSENMSFNDTLENLHDGRYLQDPLGMAVAKMSYLVYSLGEGIIGQVAVTGKHQWIFADKAASCSWSSSEYCDGWQAQFLAGIRTIAVVSVVPYGVVQLGSLNTVIEDMKLVTHIKDAFHSLQNSSVEFLPSPVHYIVESNSCSRSDKAINNKKPDIQSHLSSSPGKCNELSQDVFPLPGPHKKNAVEVVCGHAGIESPTIRDNGSAELLQPKSGFFTLEHQNEVQMKVINNKRFGEENSGWQDMLEGSKHNDAPASCNFPAESANLNNFTLPVDKSGLDYPFLPLDLLDSAVWDRVVYLQNEEIHSPEPLETQLGKGLVQKPELWPKSSHPDTVNNSFMFSAGCELHEALGSAFKKEQDSCAWSESERTESGLLFEPPEGMISTWFSTECGSDLLEAVVANACPGSSNVKSESSLCNSEQSLLTTEKPPHKHGTGPAGGSVVKSSLLVEDDAHHHLNSIWESTGVGVVRSPKESSPKTLSTCSEQLEMRVEPARINRKRARPGESCRPRPRDRQLIQDRVKELRELVPNGSKCSIDALLEHTVKHMLFLQSVTKHADKLRKCGELKEMGLLGSCSREHGSSWALEVGSQTKVCPIIVENLNMNGQMLIKILCEGCNHFLEVAEAIRGLGLMILKGLMEARGEKSCACFVVEGQNNRGLRRMDILLSLMQLLQPKTTI* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00556 725 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Eupl12g00556 725 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 724 IPR043561 GO:0003700|GO:0006355
Eupl12g00556 725 MobiDBLite consensus disorder prediction 467 489 - -
Eupl12g00556 725 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 548 597 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00556 Eupl-Chr12 19117514 19129157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00556 1 722 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.735 2.68e-129 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00556 - - nnu:104610047 819.69