Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00554 ATGTGGGGTAAGGGGGTGATTGTATTTATCGGTCGGAGGCAGCGGCAGGTCGATAAATTCGTCGTTAGCCGGGAAGATCTCGTCGCGAGTACGTATGGTGTTGAGCCTAAGATGGGCTATACATTTCTCTACTTCATCACAGAAGCTTCCTTCAATCATGGAATGAATCCTCATGTCTACATTACTTATCGACATATTGTATCTGGTTTCGTTATGTTGCCTTTCGCCTATTTCCTCGAAAGAAAAGTAAGGCCAAAGCTGACATTAGCATTGTTTGTAGAGTTATTTGTGCTCTCTCTCCTTGGGGTTAGCTTAACTCTGAACATGTATTTTGCGAGCTTGAGATATACCTCTCCGACCTTCATCTCGTCCATGGTCAACACCATTGCTTCCCTAACGTTTATAATAGCAGTTGTACTAAGGCGGGTTCTTGATGTTAAAAGCACTCGTGGAATGGCAAAAGTTCTTGGGACTGTAATTTCCTTAGCCGGTGTCATGACCATGACATTGTACAAAGGACCTATAGTGAAAAATTTATGGGGTGCTCTAATTCATATCCAAGGAAATAGTACCGTCCACGAGAATTGGTTGAAGGGTTCAATTCTTACCGTCGCAAGCTGCATAACATGGTCTATATGGTACATCATGCAGGCAATCACGTTGAAGAAATATCCAGCGCAACTTTCACTTACTACATGGATGAGCTTTATTGGAGGAGCACAATCAGCTGTCTTCACAGTGTTCGTACAACATAAACCGAAAGCATGGATCATTGGATTCAACATCGACTTTTGGTCCACCATATATGCTGGAGTGGTGTGCTCTGGTTTAATAATCTTCATTCAACTATGGTGCACAGAACAAAAAGGTCCAGTTTTTGTGACCATGTTTAATCCCCTTTCAACAGTATTGGTGGCATTCCTAGCATACTTTGTTCTTGGTGAAAGATTGTATATGGGAAGCATACTAGGAGGAGTTATTGTTATCGTTGGTCTCTACTTGGTGTTGTGGGGCAAAGAAGGGGATCAAGAAATTCGGATTAAGTCTCAAGAACCATCCAACTTAAGTTATGAAGAGCAAAAGGAAACCAAGATACAAGTAGTTTCTTCAGTGGACAGGGAGGCAATCTAA 1131 0.42 MWGKGVIVFIGRRQRQVDKFVVSREDLVASTYGVEPKMGYTFLYFITEASFNHGMNPHVYITYRHIVSGFVMLPFAYFLERKVRPKLTLALFVELFVLSLLGVSLTLNMYFASLRYTSPTFISSMVNTIASLTFIIAVVLRRVLDVKSTRGMAKVLGTVISLAGVMTMTLYKGPIVKNLWGALIHIQGNSTVHENWLKGSILTVASCITWSIWYIMQAITLKKYPAQLSLTTWMSFIGGAQSAVFTVFVQHKPKAWIIGFNIDFWSTIYAGVVCSGLIIFIQLWCTEQKGPVFVTMFNPLSTVLVAFLAYFVLGERLYMGSILGGVIVIVGLYLVLWGKEGDQEIRIKSQEPSNLSYEEQKETKIQVVSSVDREAI* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00554 376 Pfam EamA-like transporter family 198 336 IPR000620 GO:0016020
Eupl12g00554 376 Pfam EamA-like transporter family 52 168 IPR000620 GO:0016020
Eupl12g00554 376 PANTHER WAT1-RELATED PROTEIN 38 349 IPR030184 GO:0016020|GO:0022857
Eupl12g00554 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 172 - -
Eupl12g00554 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00554 Eupl-Chr12 19087967 19093341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00554 37 347 Nodulin-like Gene Family AT5G07050 40.867 1.77e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00554 - - qsu:111996185 553.518