Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00543 ATGGACCCATCTGTTCTGGATGGTATAATCGGTCGGCTTCTGGAAGTACGAGGCAGACCAGGGAAGCAGGTGCAGCTCTCGGAGGCGGAGATCCGGCAGCTTTGTCTTGTGTCCAAGGACATTTTCATGCAGCAGCCCAATTTATTGGAGCTTGAAGCCCCCATTAAAATTTGTGGTGATATTCATGGCCAGTATTCTGATCTTTTAAGGCTTTTCGAATATGGTGGATTTCCTCCCCAGGCCAATTACCTATTCTTGGGGGATTATGTGGATCGGGGGAAGCAAAGCTTGGAGACTATATGCCTTCTCCTTGCATATAAAATAAAATATCCAGAAAACTTTTTTCTCTTGAGGGGCAATCATGAATGTGCATCTATAAACCGTATATATGGATTTTATGATGAATGTAAGCGGAGATTCAATGTTAGGCTGTGGAAAGTCTTCACAGACTGTTTTAACTGCCTACCTGTGGCAGCTTTAATTGATGAAAAGATTCTCTGCATGCATGGGGGCCTTTCTCCTGACCTAAATGATTTGGATCAAATACGAAATTTACAACGCCCTACTGATGTCCCGGACACTGGTTTGCTCTGTGATCTTCTCTGGTCAGATCCCAGTAAAGATGTTAAAGGTTGGGGGATGAATGATAGGGGAGTTTCGTATACCTTTGGCCAAGATAAGGTGATGGAGTATCTTCAGAAGCATGATCTGGACCTTATTTGTCGTGCTCATCAGGTTGTGGAGGATGGATATGAGTTCTTTGCTGACAGGAGACTTGTAACCATATTTTCAGCACCTAATTACTGTGGTGAATTTGACAATGCGGGTGCTATGATGAGTGTGGATGAGACTCTAATGTGCTCTTTCCAAATACTAAAGCCTGCAGAAAAGAAATCGAAGTTCAGCTTTGGGAGCACAACTACAGCTAAGCCTGGAACCCCACCAGCACGAGTCAAGTCTTTCCTTGGTGCGTAA 975 0.441 MDPSVLDGIIGRLLEVRGRPGKQVQLSEAEIRQLCLVSKDIFMQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLNDLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGQDKVMEYLQKHDLDLICRAHQVVEDGYEFFADRRLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKSKFSFGSTTTAKPGTPPARVKSFLGA* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Eupl12g00543 324 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Eupl12g00543 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 12 299 - -
Eupl12g00543 324 SUPERFAMILY Metallo-dependent phosphatases 18 298 IPR029052 -
Eupl12g00543 324 SMART pp2a_7 26 296 IPR006186 GO:0016787
Eupl12g00543 324 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Eupl12g00543 324 FunFam Serine/threonine-protein phosphatase 52 305 - -
Eupl12g00543 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Eupl12g00543 324 CDD MPP_PP1_PPKL 5 294 - -
Eupl12g00543 324 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Eupl12g00543 324 Gene3D - 3 305 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00543 Eupl-Chr12 18893776 18929512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00543 33 239 Calmodulin-binding Proteins AT5G63870 31.579 1.13e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00543 K06269 - ming:122089158 630.172