Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00523 ATGGTTTCCCTGTCGACGTGGTTTCGATACATAGCACACAAGGTTGAGTACTCTGTCTCTCTCAGTTGGAAGAGTTATAAAATAGGTCAAATCACTGACAGAGAAGTAGGTGACGCCGTCTGGAAAAATGTACTTCAGGGCAAGTTGACATACTTGCATTGGAATAAAGGAGTAGAGATGACCCCTACAATAGGAGGGCAGGGGGGAACTCTTCTTGTTCGTAAACTACCAACGGCGGATCCGACGCGTGTTTTTGTTGGTGACGTGGTTGTCTTGAAGGATCCAGAGAACTCAGATAACTGCCTGGTTAGAAGATTGGCAGCCATCGAGGGGTATGAAATGGTGTCTACTGATGAGAAAGATGAGCCCTTTGTTCTTGAGAAGGATCAGTGTTGGGTGCTGTCCGACAATGAATCTTTGAAGCCTAAGCAGGAAGCAAAGGACAGTCGGACATTTGGCCCCGTTCCCATGACAGATATTGTTGGCAGAGTCGTATATTGCTTGCGAACCGCTGTAGACCATGGCCCTGTGCAGAACAGTCATTTCAGTATGCGAAAGGATTCTCCGGTGATTGCAGTTGAATTGGATGTTGATGAGATGGCTAAGAATCACAAAGCATAG 621 0.4654 MVSLSTWFRYIAHKVEYSVSLSWKSYKIGQITDREVGDAVWKNVLQGKLTYLHWNKGVEMTPTIGGQGGTLLVRKLPTADPTRVFVGDVVVLKDPENSDNCLVRRLAAIEGYEMVSTDEKDEPFVLEKDQCWVLSDNESLKPKQEAKDSRTFGPVPMTDIVGRVVYCLRTAVDHGPVQNSHFSMRKDSPVIAVELDVDEMAKNHKA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00523 206 PANTHER OSJNBA0068L06.9 PROTEIN 1 206 - -
Eupl12g00523 206 Gene3D Umud Fragment, subunit A 48 180 - -
Eupl12g00523 206 SUPERFAMILY LexA/Signal peptidase 58 168 IPR036286 -
Eupl12g00523 206 CDD S26_SPase_I 60 164 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00523 Eupl-Chr12 18546082 18560500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00523 60 177 MADS-box Gene Family AT1G29960 32.000 2.48e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00523 - - qsu:112019265 383.259