Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00510 ATGGGGAAAGAAGCTCTGCAAATGGGAGAAGAGGAGAGTTCATGCAGCATTGAAGTCTCTGGTCTGCATTTCGCCTACGAAGGCCAACCTCCATTTTTCGCCAATTTCAATCTCAAGATCTCTCCTGGTTCTCGATGTCTTCTCGTTGGCGCAAATGGATCCGGGAAGACTACTTTGTTGAAGATTCTGGCGGGCAAGCATTTGGTTGGAGGAAGAGATGTCGTACGGGTATTAAATAGCTCTGCTTTTCACGATACACAACTCGTCTGTAGTGGTGATCTAGCCTATTTGGGAGGCTCTTGGAGTAAAACCGTTGGTTCTGCTGGGGAGATTCCACTCCAAGGAGATTTCTCTGCTGAACACATGATATTTGGAGTTGAAGGTATTGATCCTGTTAGGAGAGAGAAGCTGATCGAGCTGCTTGATATTGATCTGCTGTGGCGAATGCATAAAGTATCCGATGGGCAACGACGTCGAGTCCAAATCTGCATGGGTCTTCTTCATCCATTCCAGGTGTTGTTGCTAGATGAGGTTACAGTTGACCTAGATGTTGTTGCAAGGATGGACTTACTCGAATTCTTCAAGGAAGAGTGTGATCAGAGAGGAGCAACAATTGTGTATGCAACACATATATTTGATGGATTAGAGACATGGGCAACAGATTTGGCTTACATCCAAGATGGAGAGTTTAGGAGGTTGGAGAAGCTCTCCAATATTCATGAATTGAAGAATGCCACCAATCTACTTTCAGTGGTCGAGTCCTGGCTCCGTTCTGAAACCAAGGGTGAGAACAAGAAACTCATCAATCCCCCTACCCAATTCAAAAAGACCTCTCCCTTTGATAACTCTCCTTTTAGATCATCTAGGCACATGGCCTATTACCGCTGA 888 0.4527 MGKEALQMGEEESSCSIEVSGLHFAYEGQPPFFANFNLKISPGSRCLLVGANGSGKTTLLKILAGKHLVGGRDVVRVLNSSAFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGIDPVRREKLIELLDIDLLWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATDLAYIQDGEFRRLEKLSNIHELKNATNLLSVVESWLRSETKGENKKLINPPTQFKKTSPFDNSPFRSSRHMAYYR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00510 295 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 16 249 - -
Eupl12g00510 295 Gene3D - 14 269 IPR027417 -
Eupl12g00510 295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 252 IPR003439 GO:0005524
Eupl12g00510 295 FunFam ABC transporter I family member 21 117 290 - -
Eupl12g00510 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 241 IPR027417 -
Eupl12g00510 295 MobiDBLite consensus disorder prediction 266 285 - -
Eupl12g00510 295 MobiDBLite consensus disorder prediction 266 295 - -
Eupl12g00510 295 Pfam ABC transporter 34 179 IPR003439 GO:0005524
Eupl12g00510 295 SMART AAA_5 42 229 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00510 Eupl-Chr12 18315779 18325190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00510 17 244 Calmodulin-binding Proteins AT2G36910 23.265 5.37e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00510 K12608 - ming:122069334 505.368