Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00509 ATGGATTCGGCAAGGAGTTGGTTCCATAAGTTTCAACCCCGAGATAAATTGAGGTCTTCTAATAAGAAGAAGGAGCCGGCAAGTAATAGAAAAGAAGGGTCAAAGCCGTCTACATGTGATGAAACGCCTTCAAATGTCACAAAGCAGAAGGTTGCAGCAGCAAAGCAGTACATAGAAAACCATTACAAGGAGCAGATGAAGAATTTGCAGGAGAGAAAGGAGCGACGCAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTGTCTGAGGAGGAGCAAAGCAACCTACTAAAATACTTGGAGAAGAAGGAAACAGAATACATGCGCCTTCAGAGGCATAAAATGGGAGCTGATGATTTTGAGTTGTTGACGATGATAGGAAAGGGTGCATTTGGGGAGGTCAGAGTTTGCAGGGAGAAGACAACAAGTCATGTGTATGCAATGAAGAAGCTTAAGAAATCAGAAATGCTTCGCAGAGGGCAGGTTGAGCATGTTAAAGCTGAAAGGAATCTACTTGCGGAGGTTGACAGCAATTGCATTGTCAAGCTTTATTGTTCTTTCCAAGATGAAGAGTTTTTGTATCTCATTATGGAATATCTACCTGGTGGAGATATGATGACTTTACTTATGCGGAAGGATACTTTGACTGAAGATGAGGCCAGATTTTATGTTGGGGAAACAGTTCTGGCTATTGAGTCTATCCACAAACATAATTATATCCATAGAGATATCAAACCTGACAATCTGTTGCTGGATAGATATGGTCACATGAAGCTATCAGATTTTGGACTATGTAAACCATTAGACTGCAGTACACTCCATGAAAAGGATTTTTCTGTGGGAAACAACGTTAATGGATCTCAACAGAATGACGAACGCCCTGCTGCACCAAAGCGCACACAACAGGAGCAATTACAACATTGGCAGAGAAACAGGAGGATGCTGGCTTATTCTACTGTTGGTACACCTGACTATATTGCTCCAGAAGTTTTGTTGAAGAAGGGATATGGAATGGAATGCGATTGGTGGTCCCTTGGAGCTATCATGTATGAAATGCTAGTGGGATATCCACCTTTTTATTCTGATGAACCCATGTCAACTTGTAGGAAGATTGTAAATTGGAGAACTCATTTAAAGTTTCCTGAAGAAGCAAAGCTATCTGCAGAAGCTAAAGATCTTATTAGTAAACTCTTATGCAATGTCGAGCAGAGGCTTGGAACAAAAGGCGCTCATGAAATAAAGGCTCATCCATGGTTTAAAGGTGTCGAATGGGACAGACTATATCAGATGGAAGCTGCATTTCTTCCAGAGGTCAATGATGAGCTGGATACTCAAAACTTTGAGAAGTTTGAAGAGACTGACAACCAGATTCAAACTTCATCAAAATCTGGTCCGTGGAGAAAGATGCTCTCGTCAAAGGACATCAACTTTGTGGGTTACACATATAAGAACTTTGAAATTGTCAACGATCATCAAGTTCCCGGGATTGCTGAACTGAAGAAGAAGAGCACCAAAACAAAGAGGCCATCCATCAAGTCCCTCTTCGACGACGAGACAGATAATGCTAACCAAACTGTTCAAGGGAGTTTTCTCAACCTCTTGCCTCCCAAACTAGAAGTTTCCAGAACCAAAGCGAATCCCCATAAACCCTGCTAA 1656 0.4155 MDSARSWFHKFQPRDKLRSSNKKKEPASNRKEGSKPSTCDETPSNVTKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEEQSNLLKYLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCREKTTSHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHMKLSDFGLCKPLDCSTLHEKDFSVGNNVNGSQQNDERPAAPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLISKLLCNVEQRLGTKGAHEIKAHPWFKGVEWDRLYQMEAAFLPEVNDELDTQNFEKFEETDNQIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQVPGIAELKKKSTKTKRPSIKSLFDDETDNANQTVQGSFLNLLPPKLEVSRTKANPHKPC* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00509 551 SUPERFAMILY Protein kinase-like (PK-like) 96 472 IPR011009 -
Eupl12g00509 551 Gene3D Phosphorylase Kinase; domain 1 438 448 - -
Eupl12g00509 551 Gene3D Phosphorylase Kinase; domain 1 118 203 - -
Eupl12g00509 551 MobiDBLite consensus disorder prediction 1 48 - -
Eupl12g00509 551 FunFam Non-specific serine/threonine protein kinase 91 203 - -
Eupl12g00509 551 ProSiteProfiles Protein kinase domain profile. 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00509 551 MobiDBLite consensus disorder prediction 281 305 - -
Eupl12g00509 551 FunFam Non-specific serine/threonine protein kinase 204 271 - -
Eupl12g00509 551 CDD MobB_NDR_LATS-like 54 115 - -
Eupl12g00509 551 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Eupl12g00509 551 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl12g00509 551 CDD STKc_NDR_like 118 483 - -
Eupl12g00509 551 SMART serkin_6 120 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00509 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Eupl12g00509 551 MobiDBLite consensus disorder prediction 1 37 - -
Eupl12g00509 551 Pfam Protein kinase domain 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00509 551 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 478 - -
Eupl12g00509 551 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Eupl12g00509 551 Gene3D Transferase(Phosphotransferase) domain 1 204 269 - -
Eupl12g00509 551 Gene3D Transferase(Phosphotransferase) domain 1 315 437 - -
Eupl12g00509 551 FunFam Non-specific serine/threonine protein kinase 318 437 - -
Eupl12g00509 551 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl12g00509 551 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00509 Eupl-Chr12 18277594 18296553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00509 1 540 AGC Kinase Gene Family AT3G23310 80.074 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Eupl12g00509 Pkinase 1.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00509 K08790 - nnu:104600901 1009.59