Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00505 ATGGAGAATGCTATCGGTGGAAAGTTCAAGCTTGGGCGGAAGATCGGGAGTGGATCTTTTGGCGAGCTTTACCTAGGCGTTAACATACAAAGTGGAGAGGAGGTTGCGATCAAGCTGGAATCTGTGAAGACCAAGCACCCTCAGCTTCACTACGAGTCAAAATTGTATATGCTCCTTCAAGGAGGAACGGGAATTCCCCACCTGAAGTGGTTTGGAGTCCAGGGTGAGTACAATGTCATGGTTATTGATCTTCTTGGGCCAAGCTTGGAGGACCTGTTCAACTACTGCAATCGGAAGTTCACGTTGAAAACAGTGCTGATGCTTGCAGATCAGTTAATTAATAGAGTTGAGTACATGCATTCAAGGGGTTTTCTTCACCGTGATATCAAGCCTGACAACTTCTTAATGGGCTTAGGGCGCCGAGCAAATCAGGTATACATCATTGACTATGGCCTTGCAAAAAAGTACAGGGATCTTCAAACTCATAAGCACATACCATACAGGGAAAACAAGAATCTCACGGGAACAGCTCGCTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGGAGAGATGATCTGGAGTCTCTTGGTTATGTGCTCATGTATTTTTTAAGGGGAAGTCTTCCCTGGCAGGGTCTGAAAGCTGGAACTAAAAAACAGAAGTATGATAAAATCAGTGAAAAGAAGATGCTAACTCCTGTTGAGGTGCTTTGCAAATCATACCCATCAGAGTTTATATCGTACTTCCACTATTGTCGATCATTGCGTTTTGACGACAAACCAGATTATTCATATCTGAAAAGGCTTTTCCGTGACCTGTTTATTCGAGAAGGTTATCAGTTTGATTATGTATTCGACTGGACTATATTGAAGTACCCCCAGATTGGTGCCAATTCTAGAGCACGGCAGCCCAGTGGAAAAATAGGTGCAAATCCAGGACCATCTGCAGAAAGAGCAGAAAGATCAGTTGGACAAGAGATTCGAGATAGATTCTCTGGTGCAGTCGATGTGTTTGCTAGAAGAAACACTTCGGGCTCTGGTCTGCATGGTGATCATTCCAAGCACAAGAACTCAGAGGATCCACCATCATCCAAGGAGGTGGCAGCTGATTCCGAAAGACCTCGCACTTCCTCTCGGAATGGCAGCACATCAAAGAGGGCTATTATTTCAAGTGGCCGACCAAGCTCCTCAGGTGAGCCCAGCGAGAGTCGGTCAAGCCGACTACTCTCAAGCAGCGGCCGCCTGTCCTCTAACCAGAGGATCCAACCTGGGTACGAGTCCAAATCTTCGTCCCTCTCCCGTACTATGGCGACAAGAGATGCCCGCGAAGATATTATGCGGAGCCTTGAGCGCCTCTCAGTGGGCACAGAGAAGAGGAAGTAA 1392 0.4655 MENAIGGKFKLGRKIGSGSFGELYLGVNIQSGEEVAIKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVQGEYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRRANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVLCKSYPSEFISYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGANSRARQPSGKIGANPGPSAERAERSVGQEIRDRFSGAVDVFARRNTSGSGLHGDHSKHKNSEDPPSSKEVAADSERPRTSSRNGSTSKRAIISSGRPSSSGEPSESRSSRLLSSSGRLSSNQRIQPGYESKSSSLSRTMATRDAREDIMRSLERLSVGTEKRK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00505 463 CDD STKc_CK1_delta_epsilon 8 282 - -
Eupl12g00505 463 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Eupl12g00505 463 Gene3D Transferase(Phosphotransferase) domain 1 1 333 - -
Eupl12g00505 463 MobiDBLite consensus disorder prediction 302 326 - -
Eupl12g00505 463 PANTHER CASEIN KINASE-RELATED 13 385 - -
Eupl12g00505 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Eupl12g00505 463 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Eupl12g00505 463 MobiDBLite consensus disorder prediction 377 439 - -
Eupl12g00505 463 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00505 463 MobiDBLite consensus disorder prediction 345 463 - -
Eupl12g00505 463 FunFam Putative Casein kinase I 1 85 - -
Eupl12g00505 463 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00505 463 FunFam Casein kinase 1-like protein 1 330 - -
Eupl12g00505 463 MobiDBLite consensus disorder prediction 440 463 - -
Eupl12g00505 463 SMART serkin_6 9 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00505 463 MobiDBLite consensus disorder prediction 350 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00505 Eupl-Chr12 18194945 18211505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00505 2 213 MAP Kinase Kinase Kinase AT3G06030 26.577 4.42e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Eupl12g00505 Pkinase 5.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00505 K08960 - mnt:21404312 798.89