Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00502 ATGGCTTTAAAGGATCTTCCTCGCAAGCTCAAGGCAATTCGGGTCAGAGGATTTCTCACAAGAGGACAGAGCAGTAAGGAAGAGCCTGCAAAGAAGCCATCATGGATGATGCCCATCTCACATGGATTCCACGTCGTCAATCGGTCGTTGATAAGTGGATCGGACGACTCGGAATCGGACTTGGTTGTAGTACAGAGAGAGCAAATAGAAGATCTAGAAGTGTGGTTATTTGGAGTCTCTGATGCACAGATGGGACATGGTGTCGCCAAATACTTGCAATCTCATCTCTTCGATAAGAATCTCAACGAGAGTCAAATAAGGAAGAAAAGCAAAGAGACAATGAAGAAGGCTTATCTTTCAACCAGAGCAAAAATGTATGAAGGAAAGCAAGAAGATGAAAATTTAACAGAGGGTTCAACATCTGCAATTGTGATTCATGGAGAAAAGATCGTAACAGCAAACATGGGTAACTATAGAGCCGTTATATGTAGAGACGGTGTCGCCAATCAAATATGCGGTAGGAACGGACGCAGTCCGAAGAAACGCTGGTCTCTGAATTTAATTTCAGGTGCGTTGCGTATGCGCTTAGGCAATACCGACACGAAGCCTAGTAGAAGCTCAGAACCAGCTGTTGGCGTCGAAAAGATCGATTCCGATACAGAATTCGTTATCCTAGCAAGCAATGGCATATGGGAGGTGATGAAGAATCAGGAGGCTGTGAACCTCATCATGCATATAAACGACCCACAAGAAGCTGCCGAATGCTTAGCAAAGGAAGCCTTGACAAGAATGAGCAAAGGCAACATTTCATGCTTAGTCATACGCCTTGATTTGTAG 837 0.4432 MALKDLPRKLKAIRVRGFLTRGQSSKEEPAKKPSWMMPISHGFHVVNRSLISGSDDSESDLVVVQREQIEDLEVWLFGVSDAQMGHGVAKYLQSHLFDKNLNESQIRKKSKETMKKAYLSTRAKMYEGKQEDENLTEGSTSAIVIHGEKIVTANMGNYRAVICRDGVANQICGRNGRSPKKRWSLNLISGALRMRLGNTDTKPSRSSEPAVGVEKIDSDTEFVILASNGIWEVMKNQEAVNLIMHINDPQEAAECLAKEALTRMSKGNISCLVIRLDL* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00502 278 SMART PP2C_4 41 274 IPR001932 -
Eupl12g00502 278 CDD PP2Cc 76 276 IPR001932 -
Eupl12g00502 278 PANTHER PROTEIN PHOSPHATASE 37 275 IPR015655 GO:0004722|GO:0006470
Eupl12g00502 278 Gene3D - 45 278 IPR036457 -
Eupl12g00502 278 ProSiteProfiles PPM-type phosphatase domain profile. 40 276 IPR001932 -
Eupl12g00502 278 Pfam Protein phosphatase 2C 72 168 IPR001932 -
Eupl12g00502 278 Pfam Protein phosphatase 2C 196 269 IPR001932 -
Eupl12g00502 278 SUPERFAMILY PP2C-like 49 277 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00502 Eupl-Chr12 18122708 18127624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00502 1 276 PP2C-type Phosphatase Gene Family AT3G23360 47.292 1.38e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00502 K19704 - tss:122642504 340.887