Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00464 ATGTTAAAACGAGGAGAAGCCATGACACTAATTCAAAAACCTTCTCTTCTTCTTCTCTTTCTTCTCTTTTTGTTGGTCTTTCCATTGAAGATATCTTCATCACAAAGAACAGAAGCAGAAGCTCTGATCAAATGGAAGACCAACTTATCTTCTCCTTCTGCTTCTCTCAATTCATGGTCCCTCACCAATATCCAAAACCTCTGCAATTGGACTGGCATCATCTGCAACAATGGCGGAAGTGTCGCCGAGATAATCCTCCGCAGTATGAATCTCACTGGAACACTCAACCAATTCAACTTCTCATCCCTCCCCAATCTCACCCGCTTCGATCTCAATTTCAACAAATTAGTAGGAACAATACCACCCAGCATTGCCAACCTCTCCAAGCTCACTTTCTTGGACCTGGGCAGCAACAATTTCTCTGAAGCCATCCCTCCAGTTATCGGACAGTTATCGGAGCTCCACAACCTCCAACTATACAACAACAATCTCATGGGTCCAATTCCATATCAGCTTAGTAGTCTCCAAAAGGTATGGTACTTGGACCTCGGATCGAATTACTTAGAATCCCCAGACTGGTTAAGGTTCACCAGCATGCCTTATCTGACACACCTTAGCCTGTTCCTTAACGAGCTAACCTCGGAGTTCCCGTCTTTCATTCTCAATTGTCGGAATCTGATGTACCTCGACTTGTCACAAAATAAATTGACAGGTCCAATACCACAGACCTTAACAACCAATTTACAGAAGATAGAATACCTCGATCTTACTGAGAATTCCTTTCAAGGACCATTACCTGTAGACCTGTCAAAGTTTCTTCTACTCAAAGAACTACGTTTAGGATTGAACAATTTCACTGGGGAGTTACCATCGGATATTGGCTTGATTTCAAATCTTCGTATTCTCGAACTGTATAACAATTCACTAGGTGGGCAGATTCCTTCTTCTATAGGCCAGCTTCTGATGCTTGAGAAACTCGATCTCCATGGTAACAGATTGAATTCTTCCATTCCTTCTGACCTTGGTTGCTGTACTAACCTCACCTTCATAAACCTATCGCTAAATTCCCTCAATGGGGTACTACCTCCATCTCTATCCAATCTTACCAAGATGTCCGAGATGGGTATCTCTGATAACTTTCTCTCTGGTGATATCTCATCTTACTTCATTACCAATTGGACACAATTGATCTCCTTGCAACTCCAGAACAATTATTTCACTGGAATGATCCCGCCTGAGATTGGCAGATTGACAAAGCTCCGTATCCTCTTCCTTTATAATAATCAGCTTTCGGGTTCAATACCGCCAGAGATCGGAAACTTGAAAGATTTGTCGGGGCTAGATCTCTCGGAAAACATGATCACTGGTCCAATACCTTCCACGTTGGGAAATCTAGCACAACTTCGCATCTTACATCTTTTCTATAACAACCTCATCGGTACGATCCCACCAGAGATTGGAAACCTGACGTATCTAAGCACTCTTGATCTCAACACCAACAAATTACATGGTGAGGTGCCAGACACTATCTCTCGCCTTGAGAACCTTCAGAATATCTCATTATTCACCAACAATTTTTCTGGTGGCATTGCAAAGGATTTCGGCCAAAATATGTCCTTGATCTATGTCAGCTTCTCGAACAATAGCTTCTCGGGTGAACTGCCGCCGGGGCTGTGTAATAACTTCTCCCTCGAACATTTCACGGCCAATGGCAATAACTTTACAGGACCATTGCCGGATTGCCTGCGAAATTGCTCAAGACTAGTCAGAGTTCGGCTTGAAGGGAACCGATTCAACGGAGACATATCAAAAGCATTTGGGGTGCATCCAAATCTTGTGTTCCTAGATCTCAGTAGGAATCAATTGTCGGGTGAGCTCTCACCAGAGTGGGCAAAATGTGAAAATCTTACTTATTTGCACATAGACGGAAATAAAATTTCAGGTGAAATTCCAGCTGAGCTTCGGAAGTTGACTCAATTACAGGATCTGAGCCTATCTTCGAATGAACTGATGGGAAAGATTCCTATTGAATTATTCGATGTAGACTTGTTATACAAGCTCAACTTGAGCAACAATCACTTAACAGGAGTGATCCCTCAGGGAATCAGCAAGTTATCTAAGCTTCAAAGTCTTGACTTGTCGGGAAATGAACTCGCCAGCAACATACCTGAAGAGCTTGGAAATTGCGTCGGCTTATTAACGTTGAACTTAAGCAACAACAATTTATCAGGTGAAATACCATCTGAGCTTGGCAATTTGGCTGCATTGCAGTACTATTTAGATCTCAGCAACAATTTGCTATCTGGACCAATCCCTCGTGGCCTTGACAAGCTGACCTCACTTCAAGATCTCAATCTTTCCCATAACAAGCTCTCAGGTAGAATCCCATCCACATTATCCAACATGTTTAGTCTTCAATCAGTCGACTTCTCATACAACAACTTGACGGGTCCAATTCCAAATTTTCGACAAGCAGTCCACGAGGTCTTAGTGGGAAACTCAGGCTTATGTGGAGATGCTGAAGGACTACCCCCTTGTAGTTCCAGTCTCAACAGAAGTGGATCTCACAAGAACAAAAAGAAACTCCTTATTGCTGTCATTGTCTCCGTCGTCGGTGGCATTTTATTGCTTGCAACCATCCTTACTGGAATTCTAGTCTCGAGAAGGAAACCAAGACAATCAGACGAAGAAATCGTAAGAACTGAAAATTATGAGGGTTCTCAACTGTTGATTTGGGAAAGAGAAGGAAAATTCACCTTTGGTGATATAGTGAAAGCCACCGATAACTTCCACGATGAATGCTGTATTGGTAAAGGAGGATTTGGAAGAGTTTACAAAGCAGTGTTGCGGACGGGTCAGATTGTCGCTGTAAAACGACTAAATATGTCAGATTCAAGTGATATCCCAGACACAAATCGACGAAGTTTCGAGAATGAGATACGTACATTAACGGAAGTCCGGCACCGGAATATCGTTAAACTGTACGGATTCTGTTCTGTCAATGGTTGTATGTATTTGGTGTATGAGTATGTAGAGAGAGGTAGTTTGGGTAAGGTTTTGTATGGGCAAGAAGGGGAAATGCAGCTGGACTGGGTGACAAGGGTTAAGGTTATCCAAGGTGTGGCGCACGCTATCGCTTACTTGCACCATGACTGCTCACCCACTATTGTGCACCGGGACATATCGTTGAACAATATTTTGCTGGAGGTGGGGCTCGAACCACGGCTCTCTGACTTTGGAACGGCGAGATTGTTGAGCTCAGATTCATCCAACTGGACCACGGTTGCTGGATCTTATGGCTACATGGCTCCAGAACTTGCATATACAATGAAGGTGACTGAAAAATGTGACGTTTATAGCTTTGGAGTGGTAGCACTAGAAGTCATGATGGGAAGACATCCAGGAGAGCTCATCTCCACTCTATCGTCACTGTCATCTGATAACCAGGACTTGCTGTTGAAGGATGTGTTGGACCAACGGCTCCCACCTCCCACAGGTCAATTGGCAGAGGAGGTGGTGTTTGCAGTTACAATGGCCCTAGCATGTACAAGTGCCAATCCTGAGTCACGACCACCCATGCGTTTCGTGGCTCAGGAGTTGTCGTCTCGGACTCAAGCATATCTGTCCGAGCCATTACAATTACCATGA 3648 0.4375 MLKRGEAMTLIQKPSLLLLFLLFLLVFPLKISSSQRTEAEALIKWKTNLSSPSASLNSWSLTNIQNLCNWTGIICNNGGSVAEIILRSMNLTGTLNQFNFSSLPNLTRFDLNFNKLVGTIPPSIANLSKLTFLDLGSNNFSEAIPPVIGQLSELHNLQLYNNNLMGPIPYQLSSLQKVWYLDLGSNYLESPDWLRFTSMPYLTHLSLFLNELTSEFPSFILNCRNLMYLDLSQNKLTGPIPQTLTTNLQKIEYLDLTENSFQGPLPVDLSKFLLLKELRLGLNNFTGELPSDIGLISNLRILELYNNSLGGQIPSSIGQLLMLEKLDLHGNRLNSSIPSDLGCCTNLTFINLSLNSLNGVLPPSLSNLTKMSEMGISDNFLSGDISSYFITNWTQLISLQLQNNYFTGMIPPEIGRLTKLRILFLYNNQLSGSIPPEIGNLKDLSGLDLSENMITGPIPSTLGNLAQLRILHLFYNNLIGTIPPEIGNLTYLSTLDLNTNKLHGEVPDTISRLENLQNISLFTNNFSGGIAKDFGQNMSLIYVSFSNNSFSGELPPGLCNNFSLEHFTANGNNFTGPLPDCLRNCSRLVRVRLEGNRFNGDISKAFGVHPNLVFLDLSRNQLSGELSPEWAKCENLTYLHIDGNKISGEIPAELRKLTQLQDLSLSSNELMGKIPIELFDVDLLYKLNLSNNHLTGVIPQGISKLSKLQSLDLSGNELASNIPEELGNCVGLLTLNLSNNNLSGEIPSELGNLAALQYYLDLSNNLLSGPIPRGLDKLTSLQDLNLSHNKLSGRIPSTLSNMFSLQSVDFSYNNLTGPIPNFRQAVHEVLVGNSGLCGDAEGLPPCSSSLNRSGSHKNKKKLLIAVIVSVVGGILLLATILTGILVSRRKPRQSDEEIVRTENYEGSQLLIWEREGKFTFGDIVKATDNFHDECCIGKGGFGRVYKAVLRTGQIVAVKRLNMSDSSDIPDTNRRSFENEIRTLTEVRHRNIVKLYGFCSVNGCMYLVYEYVERGSLGKVLYGQEGEMQLDWVTRVKVIQGVAHAIAYLHHDCSPTIVHRDISLNNILLEVGLEPRLSDFGTARLLSSDSSNWTTVAGSYGYMAPELAYTMKVTEKCDVYSFGVVALEVMMGRHPGELISTLSSLSSDNQDLLLKDVLDQRLPPPTGQLAEEVVFAVTMALACTSANPESRPPMRFVAQELSSRTQAYLSEPLQLP* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00464 1215 SMART LRR_typ_2 778 802 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 127 151 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 417 441 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 705 729 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 465 489 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 657 681 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 103 126 IPR003591 -
Eupl12g00464 1215 SMART LRR_typ_2 320 344 IPR003591 -
Eupl12g00464 1215 FunFam Leucine-rich repeat receptor protein kinase MSP1 893 1010 - -
Eupl12g00464 1215 Gene3D Transferase(Phosphotransferase) domain 1 1011 1210 - -
Eupl12g00464 1215 FunFam Leucine-rich repeat receptor protein kinase EMS1 434 533 - -
Eupl12g00464 1215 FunFam MDIS1-interacting receptor like kinase 2 35 193 - -
Eupl12g00464 1215 Pfam Protein kinase domain 931 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00464 1215 Pfam Leucine rich repeat 684 742 IPR001611 GO:0005515
Eupl12g00464 1215 Pfam Leucine rich repeat 610 670 IPR001611 GO:0005515
Eupl12g00464 1215 Gene3D Ribonuclease Inhibitor 390 510 IPR032675 -
Eupl12g00464 1215 Gene3D Ribonuclease Inhibitor 35 191 IPR032675 -
Eupl12g00464 1215 SUPERFAMILY RNI-like 86 441 - -
Eupl12g00464 1215 ProSiteProfiles Protein kinase domain profile. 930 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00464 1215 SMART LRR_sd22_2 778 801 - -
Eupl12g00464 1215 SMART LRR_sd22_2 489 518 - -
Eupl12g00464 1215 SMART LRR_sd22_2 417 449 - -
Eupl12g00464 1215 SMART LRR_sd22_2 103 129 - -
Eupl12g00464 1215 SMART LRR_sd22_2 609 638 - -
Eupl12g00464 1215 SMART LRR_sd22_2 705 724 - -
Eupl12g00464 1215 SMART LRR_sd22_2 223 256 - -
Eupl12g00464 1215 SMART LRR_sd22_2 657 678 - -
Eupl12g00464 1215 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Eupl12g00464 1215 CDD STKc_IRAK 936 1200 - -
Eupl12g00464 1215 ProSitePatterns Protein kinases ATP-binding region signature. 936 958 IPR017441 GO:0005524
Eupl12g00464 1215 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 537 850 - -
Eupl12g00464 1215 FunFam Leucine Rich Repeat family protein, expressed 194 289 - -
Eupl12g00464 1215 Pfam Leucine Rich Repeat 780 801 IPR001611 GO:0005515
Eupl12g00464 1215 SUPERFAMILY Protein kinase-like (PK-like) 916 1200 IPR011009 -
Eupl12g00464 1215 Gene3D Ribonuclease Inhibitor 519 849 IPR032675 -
Eupl12g00464 1215 Gene3D Ribonuclease Inhibitor 192 389 IPR032675 -
Eupl12g00464 1215 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 290 389 - -
Eupl12g00464 1215 Gene3D Phosphorylase Kinase; domain 1 892 1010 - -
Eupl12g00464 1215 SUPERFAMILY L domain-like 376 675 - -
Eupl12g00464 1215 PANTHER LEUCINE RICH REPEAT KINASE 2 30 227 - -
Eupl12g00464 1215 SUPERFAMILY L domain-like 609 827 - -
Eupl12g00464 1215 PRINTS Leucine-rich repeat signature 226 239 - -
Eupl12g00464 1215 PRINTS Leucine-rich repeat signature 778 791 - -
Eupl12g00464 1215 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1056 1068 IPR008266 GO:0004672|GO:0006468
Eupl12g00464 1215 FunFam MDIS1-interacting receptor like kinase 2 1011 1206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00464 Eupl-Chr12 17278923 17283808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00464 6 651 Receptor kinase-like Gene Family AT4G08850 34.308 2.52e-95 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl12g00464 Pkinase 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00464 - - nnu:104600953 1634