Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00463 ATGGAAAGAACATTTCAGAAAACAGTTTTCTGTCTCTTCCTCTCATTAGCAATAGTAGAAATCTCAGCACAAAAAGAAGCAGAAGCTTTGTTGAGATGGAAGAACAGTTTGAATTCTCACTCTCTTACTTCATGGTCTCTCACCAATGGAAGCAGCAGTCCTTGCAACTGGACTGGAATTCGATGCAACAGAGTCATGGATGTCATTGAGATAAACCTTTCCAACTCAGGACTCGACGGCACTCTCGACCAATTCGACTTCACAGTCTTTCCAAATCTCACCTCCCTCAATCTCAATCTCAACAACTTGGTTGGAGCAATCCCAATTCAAATTGGGTTGCTTTCGAAACTCATTTATCTTGATCTGGGTAGCAACAATTTCACATATACGATCCCCTCGGAGTTCGGAAGCCTCTTTGAACTCCGCCAGCTTAACGTCTCCAACAATTCGCTCACCGGTGCAATTCCGTATCAGCTCAGCGACCTACAAAAGGTATGGGATCTCAATCTTGGTGGAAACTATCTAGCAAATCCCGACACAGTTCGTTATAAAGGCATGCCATCATTGACATACCTCCGGATCAATCTCAATTCTCTGGAACCAGAGGTCCCCCTGTTCATCTTTCAGTGTCCTAAGTTAATCTATCTTGACTTGTCTGAAAATCTTATCACAGGTCCAATTCCAGTTCAACTTGCAACTAGTCTTAAGAACCTTGAGTTCCTTAACCTGACTTCTAATTCTTTCGAGGGACCGATTCCAGCGGAAATCTGGAACCTTACCAAACTTAGAGACTTGAGGCTGGGAAAAAACAACCTGAATGGTACGATACCGCACGAAATCGGTCTCTTGTTCAACCTCAGAATCCTGGAATTGCGAGAGAATCTGTTTAGTGGACCAATACCATCTTCAATAGGAAATCTTACAATGCTGCAGAGGTTAGATCTTGGGAGTGCAGGCTTGAATTACAGCATCCCAAATGAGCTTGGCTTTTGCAAAAACCTTGCTTTTCTTGAACTGTCAATAAACAACCTTTCAGGTCCCTTGCCTCCTTCCATGGCTTCACTAACACAAATTTCTGAGCTTGGAATTTCTGGCAATCAACTATCTGGTGAAATTCTTCCATATTTCCTATCCAATTGGACCCAACTCATTTCCTTGCAATTCCAGAAGAACAAACTCACAGGAATAATTCCTTCTGAAATTGGGTTGCTCCATAAGCTCAAATTTTTATACCTATTTGAGAACCAATTATCAGGTTCCATACCTTGGGAGATTGGAAACTTGTTGAATTTGACACAGCTTGACTTGTCCGAAAACCTTCTTACCGGTATAATCCCATCGAGCATAGGAAACTTAACTAGGATTTCAAGCATGAGTTTCTTTAGTAACCAACTCAATGGAATCCTTCCCCAGGAAATAGGTAACATGGAGAGCCTAATTGAGCTTGATTTGAGCTCAAACATGCTGCAAGGAACCTTGCCTTCATCGATAACCCGCCTACAAAACTTGGTTCTCTTCTATATTTCAAATAACAGATTCTCTGGTAGTATACCCCAAGATTTTGGCCCCAGTTCTCTCACAAATGTCAGCTTCGCCTACAACAACTTCTCCAGCAATCTCCCTCCCCAAATTTGTGGAGGGGGGCAGCTCATATACTTGTCAGCCAACAGAAATAGACTACAGGGACTGATTCCTGAAAGCCTTAGAAACTGCACTGGATTAATTAGAGTTCGCCTTGAAGAGAACCTCCTTGAAGGAGACATCAAAAATGCATTTGGGGTATACCCAAATCTGGTGTACATTGACTTGGGCGATAACCGACTGTCTGGTGAATTGTCACCAAATTGGGGAGAAAGTACGAATCTCTCGTTCTTCCGAGTATCCGCCAATTTAATATCAGGCAAAATCCCATCGGCGATCAGCAATTTGAAAAGTCTGCGAGACCTTGGCCTTTCTTCTAATCAACTAACTGGAGAAATTCCAGTCGAGCTCTTTGATTCTGCTTCACTTCTCTTCAAACTGAATTTGAGCAGCAATCAGCTCTCAGGGCAGATACCAGCAGAGATTGGAAAGCTATCACGTCTACAAATTTTGGACTTGTCAGGAAACACTCTAAGTGGGCCAATACCAGAGAAACTTGGCGATTGCGAAGATCTAATATCGTTGAAACTTGGCGATAATGACTTAAATGGGACAATCCCATTCCAGCTCGGAAACCTAGTGGCCTTACAGACTGTCCTAGACCTCAGTCAAAATTCATTCACTGGAGAGATATCGCCACAGCTGGGGAAGTTGAGATCATTAGAAAATTTGAATCTTTCTCACAATAGGCTTTCAGGTTCAATACCCACTGCCCTGCGGGATTTGAATAGCCTTCAGTCTGTTGATGTATCATATAACAACCTCGAGGGTCCAGTTCCAGAACTTAAGGCCTTTCAACAAGTTCCTGCATTGGAAGGTAATCCAGGTCTGTGCAGCGACAAGGTGCAAGGTTTGAGCCCTTGTAGTAGCAATTCTTCGTCTATAAACCCCAGAAACAATAACCAAAAACTGGTAATTGCTGTGGTTGTTCCGATAGGTGCTGCCATAATTCTTATATCACTTTTGTTCGGAATCTTCATTTACTGCCGTACTCTCAGAGATGACCCCGATGAAGAAAACCATGATTCAGGTGGTGACAGCTCATTCTCGGTATGGAATTATGATGGGAGACTAGTGTTTAAGGATATTATCAATGCAACAGAGAATTTCAATGAGAAGCATTGCATAGGGAAAGGTGGACAAGGGATTGTGTACAAAGCACTGCTTCCTAATGGCGACGTCTTCGCTGTAAAGCGTCTTCACACGTCATCGTCCGATGAAAATGGGTCTTCTGAGGATGACCAGGACAAGAATTTTGAGTCCGAAATACATGCGCTGGCAGAAATACGGCACCGGAATATTGTAAAGATGTATGGATTCTCTTCAATTAAGGGATGCATGTTTTTGGTATATGAGTTCATGGAGAGGGGTAGTTTGGGTGAGTTGTTGTATGGGGAAAGAGAAGCAAGGATGTTGAACTGGATGATGAGGTTGAAGGTTATCAAAGGTGTGGCACATGCTTTGTCTTACTTGCACCATGACTGCACACCACCTATCGTGCACCGGGACATTTCAGGAAATAACATTTTATTGGATTCGAAATTCGAACCTAAGATATCAGACTTTGGGACTGCAAGGTTGCTGAGAGTTGGTGAGTCTAACTGGACGGCACCAGTCGGCTCATATGGCTACATTGCACCAGAGCTTGCTACTATGATGAAGGTGACAGAGAAATGTGATGTATACAGTTTTGGAGTAGTCGCATTGGAAGTAGTAATTGGAAAACACCCCGGCGAACTCCTTTCGCACCTACAATCGGAAGGAAATGACCTGCTTCTAATGAATGCGTTAGACCAACGCCTTCCACCTCCAACAGGTTTCATTCAACAAGAGCTAGTTTTGGTGGCGATCCTTGCTTTGGCATGCACACGTACAAATCCCAGGTCTCGACCCACCATGGATCAAGTGTCTAGTGAACTGTCTGCACAAACATATCTGCCTCTCTCTGAGCCTTTTCACATGCTCACGCTGCAAAAATTGATGAATATTTTCTGA 3636 0.4323 MERTFQKTVFCLFLSLAIVEISAQKEAEALLRWKNSLNSHSLTSWSLTNGSSSPCNWTGIRCNRVMDVIEINLSNSGLDGTLDQFDFTVFPNLTSLNLNLNNLVGAIPIQIGLLSKLIYLDLGSNNFTYTIPSEFGSLFELRQLNVSNNSLTGAIPYQLSDLQKVWDLNLGGNYLANPDTVRYKGMPSLTYLRINLNSLEPEVPLFIFQCPKLIYLDLSENLITGPIPVQLATSLKNLEFLNLTSNSFEGPIPAEIWNLTKLRDLRLGKNNLNGTIPHEIGLLFNLRILELRENLFSGPIPSSIGNLTMLQRLDLGSAGLNYSIPNELGFCKNLAFLELSINNLSGPLPPSMASLTQISELGISGNQLSGEILPYFLSNWTQLISLQFQKNKLTGIIPSEIGLLHKLKFLYLFENQLSGSIPWEIGNLLNLTQLDLSENLLTGIIPSSIGNLTRISSMSFFSNQLNGILPQEIGNMESLIELDLSSNMLQGTLPSSITRLQNLVLFYISNNRFSGSIPQDFGPSSLTNVSFAYNNFSSNLPPQICGGGQLIYLSANRNRLQGLIPESLRNCTGLIRVRLEENLLEGDIKNAFGVYPNLVYIDLGDNRLSGELSPNWGESTNLSFFRVSANLISGKIPSAISNLKSLRDLGLSSNQLTGEIPVELFDSASLLFKLNLSSNQLSGQIPAEIGKLSRLQILDLSGNTLSGPIPEKLGDCEDLISLKLGDNDLNGTIPFQLGNLVALQTVLDLSQNSFTGEISPQLGKLRSLENLNLSHNRLSGSIPTALRDLNSLQSVDVSYNNLEGPVPELKAFQQVPALEGNPGLCSDKVQGLSPCSSNSSSINPRNNNQKLVIAVVVPIGAAIILISLLFGIFIYCRTLRDDPDEENHDSGGDSSFSVWNYDGRLVFKDIINATENFNEKHCIGKGGQGIVYKALLPNGDVFAVKRLHTSSSDENGSSEDDQDKNFESEIHALAEIRHRNIVKMYGFSSIKGCMFLVYEFMERGSLGELLYGEREARMLNWMMRLKVIKGVAHALSYLHHDCTPPIVHRDISGNNILLDSKFEPKISDFGTARLLRVGESNWTAPVGSYGYIAPELATMMKVTEKCDVYSFGVVALEVVIGKHPGELLSHLQSEGNDLLLMNALDQRLPPPTGFIQQELVLVAILALACTRTNPRSRPTMDQVSSELSAQTYLPLSEPFHMLTLQKLMNIF* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00463 1211 Gene3D Ribonuclease Inhibitor 499 838 IPR032675 -
Eupl12g00463 1211 FunFam Leucine-rich repeat receptor protein kinase MSP1 880 1000 - -
Eupl12g00463 1211 SUPERFAMILY RNI-like 70 394 - -
Eupl12g00463 1211 FunFam Nuclear pore complex protein NUP107 23 181 - -
Eupl12g00463 1211 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1046 1058 IPR008266 GO:0004672|GO:0006468
Eupl12g00463 1211 PANTHER LEUCINE RICH REPEAT KINASE 2 525 1196 - -
Eupl12g00463 1211 Pfam Leucine rich repeat 91 151 IPR001611 GO:0005515
Eupl12g00463 1211 Pfam Leucine rich repeat 745 802 IPR001611 GO:0005515
Eupl12g00463 1211 SUPERFAMILY Protein kinase-like (PK-like) 899 1187 IPR011009 -
Eupl12g00463 1211 Gene3D Transferase(Phosphotransferase) domain 1 1001 1193 - -
Eupl12g00463 1211 SUPERFAMILY L domain-like 591 826 - -
Eupl12g00463 1211 FunFam MDIS1-interacting receptor like kinase 2 1001 1193 - -
Eupl12g00463 1211 SUPERFAMILY L domain-like 373 662 - -
Eupl12g00463 1211 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Eupl12g00463 1211 Gene3D Ribonuclease Inhibitor 182 275 IPR032675 -
Eupl12g00463 1211 Gene3D Ribonuclease Inhibitor 276 374 IPR032675 -
Eupl12g00463 1211 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Eupl12g00463 1211 SMART LRR_typ_2 765 788 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 138 162 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 307 331 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 114 137 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 692 716 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 476 500 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 186 210 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 428 451 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 259 283 IPR003591 -
Eupl12g00463 1211 SMART LRR_typ_2 643 667 IPR003591 -
Eupl12g00463 1211 Pfam Protein kinase domain 918 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00463 1211 Gene3D Phosphorylase Kinase; domain 1 887 1000 - -
Eupl12g00463 1211 ProSiteProfiles Leucine-rich repeat profile. 767 790 IPR001611 GO:0005515
Eupl12g00463 1211 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 523 839 - -
Eupl12g00463 1211 Gene3D Ribonuclease Inhibitor 375 492 IPR032675 -
Eupl12g00463 1211 Pfam Leucine Rich Repeat 430 452 IPR001611 GO:0005515
Eupl12g00463 1211 ProSiteProfiles Protein kinase domain profile. 917 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00463 1211 FunFam MDIS1-interacting receptor like kinase 2 184 374 - -
Eupl12g00463 1211 FunFam MDIS1-interacting receptor like kinase 2 isoform A 395 497 - -
Eupl12g00463 1211 PRINTS Leucine-rich repeat signature 765 778 - -
Eupl12g00463 1211 PRINTS Leucine-rich repeat signature 431 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00463 Eupl-Chr12 17267167 17271565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00463 9 637 Receptor kinase-like Gene Family AT4G08850 32.979 2.61e-85 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl12g00463 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00463 - - nnu:104600951 1616.28