Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00462 ATGACATCAATTCAAAAACCTTCTCTTCTTCTTCTCTTTCTTCTTTTTTTGTTGGTCTTTCCATTGAAGATATCATCATCACAAAGAACAGAAGCAGAAGCTCTGATCAAATGGAAGACCAGCTTAATTTCTCATTCTGCTTCTCTCAATTCATGGTCCCTCACCAATATCCAAAACCTCTGCAATTGGACTGGCATCATCTGCAACAATGGCGGAAGTGTCGCCGAGATAATTCTCCGCAGTATGGATCTCAATGGGGCACTCAACCAATTCAACTTCTCATCCCTCCCCAATCTCACCCGCTTCGATCTCAATCTCAACAAATTAGCAGGAATGATACCACCCAGCATTGCCAACCTGTCCAAGCTCACTTTCTTGGACCTGGGCAGCAACAATTTCTCTGAAGCCATCCCTCCAGCGATCGGAGAGTTATCGGAGCTGCGGATTCTCCAACTATACAACAACAGTCTCATGGGTCCAATTCCATATCAACTTAGTAGTCTCCAAAAGGTATGGTACTTGGACCTCGGATCGAATTACTTAAAATCCCCAGACTGGTTAAGGTTCACCAGCATGCCTTATCTGACACACCTTAGCCTGTTCCTTAACGAGCTAACCTCGGAGTTCCCGTCTTTCATTCTCAATTGTCGGAATCTGACGTACCTCGACTTGTCACAAAATAAATTGACAGGTCCAATACCACAGACCTTAACAACCAATTTACAGAAGATAGAATACCTCAATCTTACTGAGAATTCCTTTCAAGGACCATTACCTGTAGACCTGTCAAAGTTTCTTCTACTCAAAGAACTACGTTTAGGATTGAACAATTTCACTGGGGAGTTACCACCGGATATTGGCTTGATTTCAAATCTTCGTATTCTTGAACTGTATAATAATTCATTAGGTGGGCAGATTCCTTCTTCTATAGGCCAGCTTCTGATGCTTAAGAAACTCGATCTCCATGATAACAGATTGAATTCTTCCATTCCTTCTGACCTTGGTCGCTGTACTAACCTCACCTTCATAGACCTATCGCTAAATTCCCTCACTGGGGTACTACCTCCATCTCTATCCAATCTTACCAAGATGTCCGAGATGGGTATCTCCAATAACTTTCTCTCTGGTGAGATCTCATCTTACTTCATTACCAATTGGACACAATTGATCTCCTTGCAACTCCAGAACAATGCTTTCACTGGAATGATCCCGCCCGAGATTGGCAGATTGACAAAGCTCCGTATCCTCTTCCTTTATAATAATCAGCTTTCGGGTTCAATACCGCCAGAGATCGGAAACTTGAAAGATTTGGGGGGGCTAGATCTCTCGGTGAACATGATCACGGGTCCAATACCTTCCACGTTGGGAAATCTAGCACAACTTAGCACCTTACAGCTTTTCTATAACAACCTCACCGGTACGATCCCACCAGAGATTGGAAACCTGACATCTCTAAGCATTCTTGATCTCAACACCAACAAATTACATGGTGAGGTGCCAGACACTATCTCTCGCCTTGAGAACCTTCAGACTATCTCATTATTCACCAACAATTTTTCTGGTGGCATTGCAAAGGATTTCGGCCAAAATATGTTCTTGATCTATGTCAGCTTCTCGAACAATAGCTTCTCGGGTGAACTGCCGCCGGGGCTGTGTAATAGCTTCTCCCTCGAACATTTCACGGCCAATGGCAATAACTTTACAGGACCATTGCCGGATTGCTTGCGAAATTGCTCAGGACTAGTCAGAGTTCGGCTTGAAGGGAACCGATTCACCGGAGACATATCAAAAGCATTTGGGGTGCATCCAAATCTTGTGTTCCTAGATCTCAGTAGGAATCAATTGTCGGGTGAGCTCTCACCAGAGTGGGCAAAATGTGAAAATCTTACTTTTTTGCACATAGACGGAAATAAAATTTCGGGTGAAATTCCAGCTGAGCTTGGGAAGTTGACTCAATTACAGGATCTGAGCCTATCTTCGAATGAATTGACGGGAAAGATTCCTATTGAATTATTCGATGTAGACTTGTTATACAAGCTCAACTTGAGCAACAATCACTTAACAGGAGTGATCTCTCAGGGAATCAGCAAGTTATCTAAGCTTCAAAGTCTTGACTTGTCGGGAAATGAACTCGCCAGCAACATACCTGAAGAGCTTGGAAATTGCGTCGGCTTATTAACGTTGAACTTAAGCAACAACAATTTATCAGGTGAAATACCATCTGAGCTTGGCAATTTGGCTGCATTGCAGTACTATTTAGATCTCAGCAACAATTTGCTATCTGGACCAATCCCTCGGGGCCTTGACAAGCTGACCTCACTTCAAGATCTCAATCTCTCCCATAACAAGCTCTCAGGTAGAATCCCATCCACATTATCCAACATGTTTAGTCTTCAATCAGTCGACTTCTCATACAACAACTTGACGGGTCCAATTCCAAATTTTCGACAAGCAGTCCACGAGGTCTTAGTGGGAAACTCAGGCTTATGTGGAGATGCTGAAGGACTACCCCCTTGTAGTTCTAGTCTCAACAGAAGTGGATCTCACAAGAACAATAAGAAACTCCTTATTGCTGTCATTGTCTCCGTCGTCGGTGGCATTTTATTGCTTGCAACCATCCTTACTGGAATTCTAGTCTCGAGAAGGAAACCAAGACAATCAGACGAAGAAATCTTAAGTACTGAAAATTATGAGGGTTCTCAACTGTTGATTTGGGAAAGAGAAGGAAAATTCACCTTTGGTGATATAGTGAAAGCCACCGATAACTTCCACGATGAATGCTGTATTGGAAAAGGAGGATTTGGAAGAGTTTACAAAGCAGTGTTGCGGACGGGTCAGATTGTCGCTGTAAAACGACTAAATATGTCAGATTCAAGTGATATCCCAGACACAAATCGACGAAGTTTCGAGAATGAGATACGTACATTAACGGAAGTCCGGCACCGGAATATCGTTAAACTGTACGGATTCTGTTCCGTCAATGGTTGTATGTATTTGGTGTATGAGTATGTAGAGAGAGGTAGTTTGGGTAAGGTTTTGTATGGGCAAGAAGGGGAAATGCAGCTGGACTGGGTGACAAGGGTTAAGGTTATCCAAGGTGTGGCGCATGCTATCGCTTACTTGCACCATGACTGCTCACCCACTATTGTGCACCGGGACATATCGTTGAACAATATTTTGCTGGAGGTGGGGCTCGAACCACGGCTCTCTGACTTTGGAACGGCGAGATTGTTGAGCTCAGATTCATCCAACTGGACCACGGTTGCTGGATCTTATGGCTACATGGCTCCAGAGCTTGCATATACAATGAAGGTGACTGAAAAATGTGACGTTTATAGCTTTGGAGTGGTAGCACTAGAAGTCATGATGGGAAGACATCCAGGAGAGCTCATCTCCACTCTATCGTCAATGTCGTCTGATAACCAGGACTTGCTGTTGAAGGATGTGTTGGACCAACGGCTCCCACCTCCCACAGGTCAATTGGCAGAGGAGGTGGTGTTTGCAGTTACAATGGCCCTAGCATGTACACGTGCCAATCCTGAGTCACGACCCCCCATGCGTTTTGTGGCTCAGGAGTTGTCGTCTCGGACTCAAGCATATCTGTCCGAGCCATTAGGCGCAATTACCATGAGTAAACTTACAAGCCTTCAGAAGTAA 3657 0.4411 MTSIQKPSLLLLFLLFLLVFPLKISSSQRTEAEALIKWKTSLISHSASLNSWSLTNIQNLCNWTGIICNNGGSVAEIILRSMDLNGALNQFNFSSLPNLTRFDLNLNKLAGMIPPSIANLSKLTFLDLGSNNFSEAIPPAIGELSELRILQLYNNSLMGPIPYQLSSLQKVWYLDLGSNYLKSPDWLRFTSMPYLTHLSLFLNELTSEFPSFILNCRNLTYLDLSQNKLTGPIPQTLTTNLQKIEYLNLTENSFQGPLPVDLSKFLLLKELRLGLNNFTGELPPDIGLISNLRILELYNNSLGGQIPSSIGQLLMLKKLDLHDNRLNSSIPSDLGRCTNLTFIDLSLNSLTGVLPPSLSNLTKMSEMGISNNFLSGEISSYFITNWTQLISLQLQNNAFTGMIPPEIGRLTKLRILFLYNNQLSGSIPPEIGNLKDLGGLDLSVNMITGPIPSTLGNLAQLSTLQLFYNNLTGTIPPEIGNLTSLSILDLNTNKLHGEVPDTISRLENLQTISLFTNNFSGGIAKDFGQNMFLIYVSFSNNSFSGELPPGLCNSFSLEHFTANGNNFTGPLPDCLRNCSGLVRVRLEGNRFTGDISKAFGVHPNLVFLDLSRNQLSGELSPEWAKCENLTFLHIDGNKISGEIPAELGKLTQLQDLSLSSNELTGKIPIELFDVDLLYKLNLSNNHLTGVISQGISKLSKLQSLDLSGNELASNIPEELGNCVGLLTLNLSNNNLSGEIPSELGNLAALQYYLDLSNNLLSGPIPRGLDKLTSLQDLNLSHNKLSGRIPSTLSNMFSLQSVDFSYNNLTGPIPNFRQAVHEVLVGNSGLCGDAEGLPPCSSSLNRSGSHKNNKKLLIAVIVSVVGGILLLATILTGILVSRRKPRQSDEEILSTENYEGSQLLIWEREGKFTFGDIVKATDNFHDECCIGKGGFGRVYKAVLRTGQIVAVKRLNMSDSSDIPDTNRRSFENEIRTLTEVRHRNIVKLYGFCSVNGCMYLVYEYVERGSLGKVLYGQEGEMQLDWVTRVKVIQGVAHAIAYLHHDCSPTIVHRDISLNNILLEVGLEPRLSDFGTARLLSSDSSNWTTVAGSYGYMAPELAYTMKVTEKCDVYSFGVVALEVMMGRHPGELISTLSSMSSDNQDLLLKDVLDQRLPPPTGQLAEEVVFAVTMALACTRANPESRPPMRFVAQELSSRTQAYLSEPLGAITMSKLTSLQK* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00462 1218 SUPERFAMILY Protein kinase-like (PK-like) 909 1193 IPR011009 -
Eupl12g00462 1218 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 283 382 - -
Eupl12g00462 1218 FunFam Leucine-rich repeat receptor protein kinase EMS1 428 526 - -
Eupl12g00462 1218 SMART LRR_typ_2 313 337 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 120 144 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 698 722 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 96 119 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 458 481 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 771 795 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 482 506 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 650 674 IPR003591 -
Eupl12g00462 1218 SMART LRR_typ_2 410 434 IPR003591 -
Eupl12g00462 1218 SMART LRR_sd22_2 650 671 - -
Eupl12g00462 1218 SMART LRR_sd22_2 698 717 - -
Eupl12g00462 1218 SMART LRR_sd22_2 602 631 - -
Eupl12g00462 1218 SMART LRR_sd22_2 482 511 - -
Eupl12g00462 1218 SMART LRR_sd22_2 410 436 - -
Eupl12g00462 1218 SMART LRR_sd22_2 771 794 - -
Eupl12g00462 1218 SMART LRR_sd22_2 337 363 - -
Eupl12g00462 1218 SMART LRR_sd22_2 216 249 - -
Eupl12g00462 1218 SMART LRR_sd22_2 96 122 - -
Eupl12g00462 1218 PANTHER LEUCINE RICH REPEAT KINASE 2 14 222 - -
Eupl12g00462 1218 Gene3D Transferase(Phosphotransferase) domain 1 1004 1203 - -
Eupl12g00462 1218 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Eupl12g00462 1218 FunFam MDIS1-interacting receptor like kinase 2 1004 1199 - -
Eupl12g00462 1218 SUPERFAMILY RNI-like 79 400 - -
Eupl12g00462 1218 ProSitePatterns Protein kinases ATP-binding region signature. 929 951 IPR017441 GO:0005524
Eupl12g00462 1218 FunFam MDIS1-interacting receptor like kinase 2 28 186 - -
Eupl12g00462 1218 Pfam Protein kinase domain 924 1184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00462 1218 FunFam Leucine-rich repeat receptor protein kinase MSP1 886 1003 - -
Eupl12g00462 1218 CDD STKc_IRAK 929 1193 - -
Eupl12g00462 1218 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Eupl12g00462 1218 Gene3D Ribonuclease Inhibitor 382 502 IPR032675 -
Eupl12g00462 1218 ProSiteProfiles Protein kinase domain profile. 923 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00462 1218 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 530 843 - -
Eupl12g00462 1218 Gene3D Phosphorylase Kinase; domain 1 886 1003 - -
Eupl12g00462 1218 Pfam Leucine Rich repeat 215 231 IPR001611 GO:0005515
Eupl12g00462 1218 FunFam Leucine Rich Repeat family protein, expressed 187 282 - -
Eupl12g00462 1218 PRINTS Leucine-rich repeat signature 219 232 - -
Eupl12g00462 1218 PRINTS Leucine-rich repeat signature 771 784 - -
Eupl12g00462 1218 SUPERFAMILY RNI-like 318 673 - -
Eupl12g00462 1218 Pfam Leucine rich repeat 677 735 IPR001611 GO:0005515
Eupl12g00462 1218 Gene3D Ribonuclease Inhibitor 503 842 IPR032675 -
Eupl12g00462 1218 Gene3D Ribonuclease Inhibitor 187 381 IPR032675 -
Eupl12g00462 1218 Pfam Leucine Rich Repeat 773 794 IPR001611 GO:0005515
Eupl12g00462 1218 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1049 1061 IPR008266 GO:0004672|GO:0006468
Eupl12g00462 1218 SUPERFAMILY L domain-like 603 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00462 Eupl-Chr12 17244146 17249316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00462 1 644 Receptor kinase-like Gene Family AT4G08850 34.105 9.64e-95 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl12g00462 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00462 - - nnu:104600953 1665.97