Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00459 ATGGAATCGAGCGGAGCAGTAGCAGAGGTGGCGGAGGTGAAGCAGCCGCATCGGCTGGAGCGAAAATGGACGTTCTGGTGCGACAACCAGTCGAAGCCCAAACAAGGCGCCGCTTGGGGGACCTCACTTCGCTTGGTTTACAGCTTTGACACCGTCGAAGAGTTCTGGTGTTTGTATGATCAGATATTTCGGCCTAGCAAGTTGCTGGTAAATGCTGATTTCCACATGTTCAGAGCTGGGATTGAACCCAAATGGGAAGATCCGGAGTGTGCCAATGGAGGCAAGTGGTCTGTTACCAGCAGCAGAAAGACAAACCTTGATACCATGTGGCTCGAAACTTTGATGGCTTTGATTGGAGAGCAGTTTGATGAGAGTGACGAGATCTGTGGCGTTGTCGCGAGTGTGCGTCAGAGGCAGGATAAGGTTGCACTGTGGACTAAGACAGCTACCAATGAGGCTGCTCAGGTTCTTATTTCTCCTTTCATTGATTACAAAGTTTTTGAATTTGTATTGGATTTTGGAAATCTAAATCATATGGATATTGTTTTTGTGAAAATGTTTTGCATTATACATAATACAACTATTTTGCATAGGCACAGATTTCCTCGTAACAAATTTTTTTTTTATAAATGA 633 0.4471 MESSGAVAEVAEVKQPHRLERKWTFWCDNQSKPKQGAAWGTSLRLVYSFDTVEEFWCLYDQIFRPSKLLVNADFHMFRAGIEPKWEDPECANGGKWSVTSSRKTNLDTMWLETLMALIGEQFDESDEICGVVASVRQRQDKVALWTKTATNEAAQVLISPFIDYKVFEFVLDFGNLNHMDIVFVKMFCIIHNTTILHRHRFPRNKFFFYK* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00459 210 ProSitePatterns Eukaryotic initiation factor 4E signature. 73 96 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Eupl12g00459 210 Pfam Eukaryotic initiation factor 4E 19 158 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl12g00459 210 SUPERFAMILY eIF4e-like 10 159 IPR023398 -
Eupl12g00459 210 Gene3D RNA Cap, Translation Initiation Factor Eif4e 2 167 IPR023398 -
Eupl12g00459 210 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 14 159 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl12g00459 210 FunFam Eukaryotic translation initiation factor 4E 8 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00459 Eupl-Chr12 17209139 17217989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00459 14 189 Eukaryotic Initiation Factors Gene Family AT5G35620 60.556 1.99e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00459 K03259 - mof:131150258 285.419