Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00452 ATGGAGCTATACGAACGAAATAACCGAAGCACTGGTAATGAGAAACATACATATCCGGTGCTACTAGATGCAGATTGGGGTTCAGAAGGTGTCTTAAAGGACGAAGAGGCCCTTTGTTTAGATGCAACATTTTATGGAAATGTTGCAAGGTTCATTAATCATAGATGTTGTGATGCCACCTTGGTGGAGATCCCAGTGGAAGTTGAGACCCCGGATCATCACTACTACCATCTAGCGTTTTTCACAACAAGGAAAGTAGATGCTTTGGAAGAGCTAACTTGGGACTATGGAATTGATTTCGATGACCATGCTCACCCTGTCAAGGCATTTCGGTGTCGCTGTGGAAGCAAATGCTGCCGAGACATGAAGCGCTCAAACAGAACTAAATTGAGCACGATAGTGACAAGGAGCACGGTATTTTCAAGGTGA 429 0.4429 MELYERNNRSTGNEKHTYPVLLDADWGSEGVLKDEEALCLDATFYGNVARFINHRCCDATLVEIPVEVETPDHHYYHLAFFTTRKVDALEELTWDYGIDFDDHAHPVKAFRCRCGSKCCRDMKRSNRTKLSTIVTRSTVFSR* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00452 142 Pfam SET domain 37 97 IPR001214 GO:0005515
Eupl12g00452 142 ProSiteProfiles SET domain profile. 1 97 IPR001214 GO:0005515
Eupl12g00452 142 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 2 130 - -
Eupl12g00452 142 SUPERFAMILY SET domain 12 120 IPR046341 -
Eupl12g00452 142 Gene3D SET domain 1 122 IPR046341 -
Eupl12g00452 142 SMART set_7 1 103 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00452 Eupl-Chr12 17084747 17097567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00452 19 120 Su(var)3-9 homologs AT1G73100 35.455 8.76e-12 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl12g00452 SET 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00452 - - msin:131240542 250.366