Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00449 ATGAGATCCTTCGTGCAGGATGCAGGTAGAAGGAAAGAGAGCGATGAAGGGGTGAGAACTTGGGTTGAACAAGTGAGAGACATGACTTACCATGTCGAGGACATCATCGACGAGTTCACGTATCACATGGGCAGCCAACGCAAAGGCACCGGCTTTATGGGTTTCACCCGTAAAACCATTCACCTACCCAATAATGTTTGGGTGATGCATCAAATGGCCACTAAGTTACAAGAAATTAGCACCCAAATTAAAGATATTTCGGAGAAGAGCAAACGATTTCGTTTTGATCGTGTAGAAGAAGTGATGACTTCACAAAATGATGCTCACGGTCACGGATGGTTGCGAATCCATGGAGAATCGTCTCTTTTTATTGAGGATGACGAGTTGGTGGGAATTGAGAAGAAAAGAGTTCTATTGTTAGGATGGTTGATGGAGAAAGAAGTTCAGCGCACTGTAATTTCGGTGTGCGGAATGGGTGGGTCGGGGAAGACTACTCTTGTGGCTAAGGTTTTCAAAAGCCAAGATGTGAAGAGATATTTCGACTGTCATGCTTGGATCAGCGTCTCCCAGAATATCATGATAGAAGACTTATTCAGAAGCATGATAAAGGAATTCTATGAGTCCAAGAAGGAATTTGTTCCAATGGACTTAGCAATGATGAACTACGGACAGCTAGTGGAGACGCTCGTCAACTTCTTGGAGCAAAAAAGGTACGTTGTTGTCTTAGATGATGTGTGGAGTATTTTTCTTTGGAGTCGAATAAACATTGTACTTCCAGATGCTGGACATGGAAGTAGGATCCTTCTTACAACTCAAAATGAGGACCTAGCTTCTTTCTCTTTTGGAGGTAGAAGCCGTGTTCACCGCATTCGATTTCTAGAAAAGAGTGAGGCTTTGGCCCTGTTTTGTAAGAAGGCATTCTCAAGGGATCAAAATACTTGTCCTCCAGAACTTGAGGGCTTGGCTCGACTCATGGTAGAAAAGTGTGGAGGCCTACCACTTGCTCTTGTAGCGATGGGGGGTCTCATGTCAATGAAAGAAAAGACGTACATGGAATGGAGGATAGTCTATAATAGCCTCACTTGGGAGCTAAGCAACAACCATATATTTGAAGTGTTGAAGAGGATTTTGTTGCTTAGTTACATTGATTTACCGTATTATCTTAAGAACTGTTTCTTGTATTGTTCTATTTTTCCGGAGGATTATCTTTTTAAGCGGACAAGGCTTAATTATTAG 1236 0.4239 MRSFVQDAGRRKESDEGVRTWVEQVRDMTYHVEDIIDEFTYHMGSQRKGTGFMGFTRKTIHLPNNVWVMHQMATKLQEISTQIKDISEKSKRFRFDRVEEVMTSQNDAHGHGWLRIHGESSLFIEDDELVGIEKKRVLLLGWLMEKEVQRTVISVCGMGGSGKTTLVAKVFKSQDVKRYFDCHAWISVSQNIMIEDLFRSMIKEFYESKKEFVPMDLAMMNYGQLVETLVNFLEQKRYVVVLDDVWSIFLWSRINIVLPDAGHGSRILLTTQNEDLASFSFGGRSRVHRIRFLEKSEALALFCKKAFSRDQNTCPPELEGLARLMVEKCGGLPLALVAMGGLMSMKEKTYMEWRIVYNSLTWELSNNHIFEVLKRILLLSYIDLPYYLKNCFLYCSIFPEDYLFKRTRLNY* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00449 411 Gene3D - 1 73 - -
Eupl12g00449 411 Gene3D - 292 384 IPR042197 -
Eupl12g00449 411 FunFam Probable disease resistance protein At1g61300 116 282 - -
Eupl12g00449 411 FunFam Probable disease resistance protein At5g66910 292 380 - -
Eupl12g00449 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 395 IPR027417 -
Eupl12g00449 411 Pfam Rx N-terminal domain 1 50 IPR041118 -
Eupl12g00449 411 CDD RX-CC_like 1 88 IPR038005 -
Eupl12g00449 411 Gene3D - 115 280 IPR027417 -
Eupl12g00449 411 PANTHER DISEASE RESISTANCE PROTEIN RP 19 409 IPR044974 GO:0006952
Eupl12g00449 411 Pfam NB-ARC domain 139 381 IPR002182 GO:0043531
Eupl12g00449 411 PRINTS Disease resistance protein signature 232 246 - -
Eupl12g00449 411 PRINTS Disease resistance protein signature 152 167 - -
Eupl12g00449 411 PRINTS Disease resistance protein signature 329 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00449 Eupl-Chr12 17040693 17042207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00449 128 352 WRKY Transcription Factor Family AT5G45050 26.201 4.39e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00449 K13457 - aew:130756305 449.899