Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00444 ATGTTACAAGACGTGATTCATCCACCGGAACAACTTCCGATCGAGGATATTTCGAGCCCGATTAGTGCTCAAATGTTCGAATTTTGCGAGCACGAAATATTTTCCGAAACGCTACAAAATTCCGAGGTCTCATCTTGCTCAAATTGTTGCCACGAAGACAATTCCTCGAACAATACCAGTCTCTCCTTCTCTTCCTTCCCTTCGGATATCGGAAAGTTCAACAACAACAACAACAACAACCTCTCCATAATTTTTGAGACTCAAGATCAGAACCATAACGACATTTCTGCATCCATAAACTTCATGACACCACCACCAATTTCAGTTCCTCCTCTTCTCACACCCCAACAATCTCAGTTTGCTGATCTCTCCTCATTGCAACCCCAAATCCCGTTTCCGGACGTCGTTAACGGGTTCTCTCCGTTCTCTCTCGACCCTGTTCTACCGCTACCTGGACAGCCATTATCATCCGTTTTTGAAGATGATTGCTTGTCTTCTTTACCTTCTTACGTGAATTTAGACCCGTCGTCTCCTTCGTGTTCTTTTCTTGATCCGACTGTCGGACCTTACTTGCCGAGGAATTTGAATACTTCATTGTCTGCCGATGCTTCCGGGATGTTTGCGCTTGTGGGATCTGAATTGCAACCCCAAGAATTGGATTTTCAAGGTGACAATGGTGGAGTTTACGGATCCGACTCGATGCAACGGGTTTACAGCACGGGAGATATACAGGCCCTTAATAATGATAATCAACAGCTGGTGAATGGGGGTGGGAATTCCAGTCTAACATCAGAAATCTCCAACTTGGAAGAATCCACCTACAAAGTTGGAAAACTCTCAGTTGAAGAAAGGAAAGAGAAGATCCATAGATACATGAAGAAGAGGAATGAGAGGAATTTCAGTAAGAAAATCAAGTATGCATGCCGAAAAACTCTAGCAGATAGTCGACCTCGCGTTAGAGGAAGATTCGCGAAGAACGATGATTTTGGAGAGACAGCAAGACCTAATTGCCGCAGTCACGACGATGACGATGATGAAGAAATAGCAGTGAAAGAAGAAGATGAGATGGTTGATTCCTCAGATATTTTTGCCCATATTAGTGGGGTGAACTCCTTCAAATGCAACTACCCCATCCAATCCTGGATATGA 1149 0.4395 MLQDVIHPPEQLPIEDISSPISAQMFEFCEHEIFSETLQNSEVSSCSNCCHEDNSSNNTSLSFSSFPSDIGKFNNNNNNNLSIIFETQDQNHNDISASINFMTPPPISVPPLLTPQQSQFADLSSLQPQIPFPDVVNGFSPFSLDPVLPLPGQPLSSVFEDDCLSSLPSYVNLDPSSPSCSFLDPTVGPYLPRNLNTSLSADASGMFALVGSELQPQELDFQGDNGGVYGSDSMQRVYSTGDIQALNNDNQQLVNGGGNSSLTSEISNLEESTYKVGKLSVEERKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETARPNCRSHDDDDDEEIAVKEEDEMVDSSDIFAHISGVNSFKCNYPIQSWI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00444 382 ProSiteProfiles CCT domain profile. 284 326 IPR010402 GO:0005515
Eupl12g00444 382 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 39 346 IPR045281 GO:0009909
Eupl12g00444 382 Pfam CCT motif 284 326 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00444 Eupl-Chr12 16899078 16904833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00444 267 332 C2C2-CO-like Transcription Factor Family AT5G24930 42.424 3.06e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl12g00444 CCT 4.9e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00444 - - ming:122092130 522.316