Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00412 ATGGAAGTAAAGAGAGAAATGGAAATCTCAGTAGAGAGTGGGTTTTGTCCTTCAACAGGCATCTACTACAGCAAATGGGATTCCCCAGACCTTCCTCAGTCTCCATCTTTCTCCCTCCCTTCCTTCCTTCTCTCACCACTATCTCCTACCAGTCTCCGAAAACCCGCCTTCATCGACTCAAAATCCGGCGATTCCATCACATATGGAGAGCTTCGATCCCTTACGTTCACCATAGCTAACACTCTAAGCTCGTTAGGTGTCAAGAAAGGCGACGTAGTGCTCGTCGTCTCGCCCAATTTCCTACATTTTCCTCTACTAGTCCTAGGAATCATGTCTGCCGGTGCCATTTTTAGCACAGCCAACCCTTTACACACTAGGCTAGAAATACAAACTCAAATTCAAGATTCGAACCCAACGTTAATTTTCACGACGGAAGAATTCCGATCGAAGCTCGACGGGCTCATCGTTAGGCCACTAATTCTAGTGGACGAGTTCATTCATGAAGTAGTACATCATCCACGACCGCACAAATGTGAATTGACGACGATCGTTCAAGGAGACACCGCAGCACTCATGTATTCTTCGGGGACGACAGGGAAGAGTAAAGCAGTCGTGTGCTCGCACCGGAATTTAATCTCCATGAGTTTCCTACTGAGGAATGTGTGGGACGCAGAGGGCGATGCATGTAACGATATTTACATGTGTGTCGTGCCATTGTTCCATATGTTTGGGTTATCGATGTTTGTGTGTGGGGTGTTAGCAATTAGATCCACAGCCGTGATCGTCCGGAAGTATACGATGCAGGAAATGCTCGGAGGAGTCGAGAAGTATAAGGTGACAAGGCTACCGGCGGTGCCGCCTATGGTGGTCCAGCTGTTGAGGTTGCGAAATGAGGTGAAGGGGTATGAATTGGGCTCCCTGAAAGAGGTGATATGCTCAGGGGCTCCCTTGGGGAGGGATCAGATGGAAAGCTTTAGCAAGTGTTTTCCTCAAGTGACACTCTCTCAGTGTTACGGATTAACAGAAACGAACGGGCCAATTACACTTTGCAATGGGATCAGCGGAAGGTTTCATGTTTCAATCGGAGCGCTAATCCCGTCTCTAGAGGCCAAGATCATCGATGTAAGAACACGCAAACCCCTCCCACCTCTCAAATGTGGAGAGCTCTGTGTAAGGGGACCTCCTGTAATGCAAGGTTACTTCAAAAACCAAGAAGCCACATCCCTTGCAATTGACAAAGATGGGTGGCTATATACCGGCGACTTATGCTTCATTGACTCGTTTGGGCTCATGTACATAGTCGACCGGATCAAGGAACTCATCAAGTACAAAGCGTACCAGGTTGCTCCTGCTGAGCTAGAGGAGATCTTGCCCACCCACCCAGAGATCAATGATGCTGCCGTAATACCGTACCCAGATGAAGAGGCAGGAGAGATCCCTATGGCTTGTGTAGTGAGAAGGGTAGGAAGCAAAGTTGAAGAAGAAGACATTATTACTTTCATGGCTAACAAGGTGGCTCCTTATAAGAAGATAAGGAAAGTGGTGTTTGTTGATTCTATCCCAAGATCACCATCTGGGAAGATCCTTAGGAGACAGCTGAAGGCCTTAACTGCACATCAACGGCTGAAAATCTCTTCCAGCTTGTGA 1647 0.4772 MEVKREMEISVESGFCPSTGIYYSKWDSPDLPQSPSFSLPSFLLSPLSPTSLRKPAFIDSKSGDSITYGELRSLTFTIANTLSSLGVKKGDVVLVVSPNFLHFPLLVLGIMSAGAIFSTANPLHTRLEIQTQIQDSNPTLIFTTEEFRSKLDGLIVRPLILVDEFIHEVVHHPRPHKCELTTIVQGDTAALMYSSGTTGKSKAVVCSHRNLISMSFLLRNVWDAEGDACNDIYMCVVPLFHMFGLSMFVCGVLAIRSTAVIVRKYTMQEMLGGVEKYKVTRLPAVPPMVVQLLRLRNEVKGYELGSLKEVICSGAPLGRDQMESFSKCFPQVTLSQCYGLTETNGPITLCNGISGRFHVSIGALIPSLEAKIIDVRTRKPLPPLKCGELCVRGPPVMQGYFKNQEATSLAIDKDGWLYTGDLCFIDSFGLMYIVDRIKELIKYKAYQVAPAELEEILPTHPEINDAAVIPYPDEEAGEIPMACVVRRVGSKVEEEDIITFMANKVAPYKKIRKVVFVDSIPRSPSGKILRRQLKALTAHQRLKISSSL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00412 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 534 - -
Eupl12g00412 548 Gene3D - 21 438 IPR042099 -
Eupl12g00412 548 Pfam AMP-binding enzyme 53 443 IPR000873 -
Eupl12g00412 548 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Eupl12g00412 548 FunFam 4-coumarate--CoA ligase 2 439 540 - -
Eupl12g00412 548 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Eupl12g00412 548 Gene3D - 439 542 IPR045851 -
Eupl12g00412 548 SUPERFAMILY Acetyl-CoA synthetase-like 54 539 - -
Eupl12g00412 548 CDD 4CL 31 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00412 Eupl-Chr12 16129328 16135483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00412 4 540 Monolignol Biosynthesis Gene Families AT1G20500 42.190 7.05e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00412 K10526 - nnu:104600985 766.533