Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00391 ATGGCGGCTCTGACCTGCTCAGCCGCCGAACTCGGCCCGCTTCTCAACAACGCCACCAACGCAACTGCCGCCGCTGCCTACATCTGCGGTCAGTTCGATACTGTATCGGCCAAACTCGTCGACGCAGGCTATGCCATCGACACCACTTACCTTCTCTTCTCTGCATACCTCGTCTTCGCCATGCAACTCGGCTTTGCCATGCTCTGCGCCGGCTCCGTTCGTGCCAAAAACACCATGAACATAATGCTCACCAATGTCCTCGACGCCGCCGCCGGTGGTCTCTTCTACTACCTATTCGGCTTCGCCTTTGCCTTCGGTGCTCCTTCCAACGGCTTCATCGGCCGTCACTTCTTCGGCCTCAAAGCCTTCCCTTCCCCTTCTTACGATTACAGTATGTTCTTGTATCAATGGGCTTTCGCTATAGCAGCCGCTGGGATTACCAGCGGTTCCATAGCGGAGCGAACTCAATTCGTCGCTTATCTGATTTACTCGTCTTTTTTGACGGGTTTTGTTTACCCAGTGGTTTCCCACTGGTTCTGGTCCGGTGATGGCTGGGCCAGTCCTACACGAGCCGACAATCTCTTGTTTGGCTCGGGAGTTATTGATTTCGCCGGATCAGGCGTTGTCCATTTGGTCGGCGGTATTGCCGGCCTATGGGGGGCCCTCATCGAGGGCCCGCGGATCGGCCGATTTGATCATTCTGGCCGAGCCGTAGCCTTACGAGGCCATAGTGCGACGTTGGTTGTGTTGGGCACGTTCTTGTTGTGGTTTGGATGGTATGGATTCAATCCAGGTTCATTTCTTAACATCTATAAGGCCTATGGAGATGGTGGGACCTATTATGGGCAGTGGAGTGCCGTCGGAAGAACAGCTGTTACGACGACGTTGGCCGGATGTACAGCTGCTCTAACTACTTTGTTTGGGAAACGATTGTTAGTTGGTCACTGGAATGTTATGGATGTCTGTAATGGATTGCTTGGTGGGTTCGCAGCAATCACGTCGGGTTGCTCGGTGGTCGAACCATGGGCGGCAATTATTTGTGGGTTTGTTGCCTCTGGAGTGTTGATCGGATTTAACAAACTTGCCGAGAAGTTGAAGTACGACGACCCGCTCGAGGCGGCGCAATTGCACGGTGGGTGTGGAACATGGGGGATTATATTCACAGCTTTGTTTGCAAAGGAAGCTTATGTTAATGAGGTGTATTCAGGGAGGCCAGGTAGGCCTTATGGGTTGTTCATGGGTGGTGGTGGTAAGCTCTTAGCAGCTCATATTATCCAAATTCTGGTGATTATTGGGTGGGTAAGCGCCACCATGGGGCCTCTATTCTACGGGCTGCACCGGTTGAAGTTACTGAGGATATCGACGGAAGACGAGATGGCCGGAATGGATCAAACGCGGCACGGAGGCTTTGCTTACGCTTATCACGATGACGATGATCTGACGCCGAAGCATGGATTCAAGTTGAGGAAGGTGGAACCCACATCAACAACTCCAACTACTAATCAAGATTCGTCACCAGTAGTCTGA 1527 0.5259 MAALTCSAAELGPLLNNATNATAAAAYICGQFDTVSAKLVDAGYAIDTTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKAFPSPSYDYSMFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASPTRADNLLFGSGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHSGRAVALRGHSATLVVLGTFLLWFGWYGFNPGSFLNIYKAYGDGGTYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLVGHWNVMDVCNGLLGGFAAITSGCSVVEPWAAIICGFVASGVLIGFNKLAEKLKYDDPLEAAQLHGGCGTWGIIFTALFAKEAYVNEVYSGRPGRPYGLFMGGGGKLLAAHIIQILVIIGWVSATMGPLFYGLHRLKLLRISTEDEMAGMDQTRHGGFAYAYHDDDDLTPKHGFKLRKVEPTSTTPTTNQDSSPVV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00391 508 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Eupl12g00391 508 FunFam Ammonium transporter 28 487 - -
Eupl12g00391 508 Gene3D Ammonium transporter AmtB like domains 26 490 IPR029020 -
Eupl12g00391 508 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Eupl12g00391 508 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Eupl12g00391 508 PANTHER AMMONIUM TRANSPORTER 18 475 - -
Eupl12g00391 508 SUPERFAMILY Ammonium transporter 45 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00391 Eupl-Chr12 15360592 15362528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00391 4 507 Inorganic Solute Cotransporters AT4G13510 78.458 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00391 K03320 - psom:113286961 824.698