Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00377 ATGCGGATGTTGATGCTTCTTCTTCTTCCTCTGCTCACCCTGGTTTCTTCCAGTTACGCAAGGTCAAAGCCAACAAGACCAAGGTTTGTTCCATCTGAACCACCAGAACCATGGACAGTTAAACCTTTCGGACCAGCACCTGCACCTACTCCTTCTCCAACATATCAAGGCCCTGCTGCCAGTCCTAGCAGTAGCTCCTCATCAAAACATCATCATCATCATAGGAAGAGACCTCATGCTGTCTCACCAACCCCTTCCACCATATCAGGTTGTGGTCAGATCACTTGTTTGGAGCCGCTTACTTCAACTCCCATCGGTTCACCATGCGGTTGTGTTCTTCCCATGCAAGTCGAACTTCACCTTGGAGTAGCTCCATATGCAGTCTTTCCTCTGGTTGCAGAGCTAGAGATTGAGGTTGCGGCAGGCATATATTTAAAACAAAGTCAAGTGGTGATAACAGGTGCCAGTGCTGATAGTCAGAATCAGGGGAAAACAGTAGTGGATATTAACTTGGTCCCACTGGGAGAGAAATTTGATAACACCACTGCTTTGCTGACTTATGAGAGATTTTGGCAGAAGAAGGTACCCATTAATATGACTCTCTTTGGTGATTATCAAGTGGCATATGTCCGTTATCCCGGGCTTCCTTCCTCACCGCCATTCGGGCCTTCTATGGGGAGTGGTCCCAGTGGAAGTGTTGGAAGTCAAGAAAATCCTATCACGGCAAATTTTCTTGGCAAGAGTCAGAAGATGAATGCTAGAACCATTGCTATCATTGCTTTGTCCACGTTTGTAGTCTTCTTGGTATGCTTTGGAGCTGTCTCCATCCTTCTAAAATGCAGGAAGCTTGGAAGACCATCAACTGCCGTTGGTCCTGCATTTACATCATCCCTTACTAAGAGAAATGGCATCAGGTCCATTATATCAAGTAGTATGGCAAGCTCAACATCTGTGTCCCTTGCTTCCGCCATGGCTACTTGTATACTCTCCGTGAGAACATTTTCGCTAGCTGAGCTTGAGAAGGCCACAGAGAAGTTTAGTTCTAAGAGGATTTTGGGTGAAGGAGGATTTGGACGCGTTTACCATGGGATCATGGAAGATGGAACTGAAGTCGCAGTTAAGTTACTTACAAGAGAGGACCAGAATGGAGATCGCGAGTTCATTGCAGAAGTTGAGATGCTAAGCAGATTGCATCACCGTAACCTCGTCAAATTGATTGGTATATGCATTGAAGATCACACACGCTGCTTGGTGTATGAAGTTGTTCACAATGGGAGTGTTGAGTCCCACTTGCATGGGCCTGACAAGAGAAGGGGGCCTCTTGACTGGGATGCTCGGATGAAGATTGCCCTTGGTGCTGCAAGAGGATTGGCATATCTTCATGAGGATTCTAATCCCCGTGTCATACACCGAGATTTTAAGGCCAGTAATGTTCTATTGGAAGATGACTTCACCCCTAAGGTTTCAGATTTTGGCCTGGCAAGGGAAGCGACAGAAGGAAGTCATCATATTTCCACTCGGGTCATGGGAACTTTTGGGTATGTTGCTCCTGAATATGCAATGACAGGACATCTACTTGTCAAGAGCGATGTCTATAGTTATGGAGTTGTATTGCTGGAGCTTCTTTCAGGAAGGAAGCCCGTAGACATGTCTCAACCTCAAGGACAAGAGAATCTTGTGACTTGGGCACGACCACTACTGACTAGCAGAGAAGGGCTGGAGCAGTTGGTGGATCCTGCATTGGGAGGAAAGTATGACTTTGACAACATGGCGCGGGTGGCAGCCATTGCTTCAATGTGCGTTCACCCAGAGGTGGCTCAGAGGCCTTTCATGGGCGAAGTTGTGCAGGCACTGAAGCTCATATACAACGATATGGATGAAACATGTGGGGATTGCTGTAGTCAAAAGGAGTCGTCATCTGGTCTCGACTGCGATGTTAAGGGCGACCTCGGCCCTTCTGATAGCAGTTGGTGGAATGCAGGTGGGGCTACGCCGCGCTTGACTTATGGGTATGCCTCTTCTTTCATAACAATGGAGTACAGTTCAGGTCCACTCGAAGAGATAGACAACAGACCTCTTTCAACGTCAAGTTTAGTTGGGGGAGGAGGATCCTTACCAGCAAAGCACATTAACAGATCAGGTCCCCTACAAACCACTCGCAAGCCAGCCTTTTACAGATTAAGGGGGAGCATGAGCGAGCATGGAGGGCTTATTTCAAGGCGTGTCTGGACTGATCGATATTGGGCTTGA 2250 0.4747 MRMLMLLLLPLLTLVSSSYARSKPTRPRFVPSEPPEPWTVKPFGPAPAPTPSPTYQGPAASPSSSSSSKHHHHHRKRPHAVSPTPSTISGCGQITCLEPLTSTPIGSPCGCVLPMQVELHLGVAPYAVFPLVAELEIEVAAGIYLKQSQVVITGASADSQNQGKTVVDINLVPLGEKFDNTTALLTYERFWQKKVPINMTLFGDYQVAYVRYPGLPSSPPFGPSMGSGPSGSVGSQENPITANFLGKSQKMNARTIAIIALSTFVVFLVCFGAVSILLKCRKLGRPSTAVGPAFTSSLTKRNGIRSIISSSMASSTSVSLASAMATCILSVRTFSLAELEKATEKFSSKRILGEGGFGRVYHGIMEDGTEVAVKLLTREDQNGDREFIAEVEMLSRLHHRNLVKLIGICIEDHTRCLVYEVVHNGSVESHLHGPDKRRGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPQGQENLVTWARPLLTSREGLEQLVDPALGGKYDFDNMARVAAIASMCVHPEVAQRPFMGEVVQALKLIYNDMDETCGDCCSQKESSSGLDCDVKGDLGPSDSSWWNAGGATPRLTYGYASSFITMEYSSGPLEEIDNRPLSTSSLVGGGGSLPAKHINRSGPLQTTRKPAFYRLRGSMSEHGGLISRRVWTDRYWA* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00377 749 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Eupl12g00377 749 MobiDBLite consensus disorder prediction 28 56 - -
Eupl12g00377 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Eupl12g00377 749 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00377 749 FunFam Receptor-like serine/threonine-protein kinase ALE2 422 638 - -
Eupl12g00377 749 Gene3D Phosphorylase Kinase; domain 1 318 421 - -
Eupl12g00377 749 Gene3D Transferase(Phosphotransferase) domain 1 422 640 - -
Eupl12g00377 749 MobiDBLite consensus disorder prediction 22 86 - -
Eupl12g00377 749 PANTHER OS01G0750732 PROTEIN 84 640 - -
Eupl12g00377 749 Pfam Protein tyrosine and serine/threonine kinase 349 617 IPR001245 GO:0004672|GO:0006468
Eupl12g00377 749 CDD STKc_IRAK 352 621 - -
Eupl12g00377 749 SUPERFAMILY Protein kinase-like (PK-like) 327 621 IPR011009 -
Eupl12g00377 749 FunFam receptor-like serine/threonine-protein kinase ALE2 319 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00377 Eupl-Chr12 14850770 14862198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00377 89 735 Receptor kinase-like Gene Family AT5G56890 55.556 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Eupl12g00377 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00377 - - nnu:104602104 1107.82