Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00346 ATGAATGGGATTCAGAACACAAGAGCTCACAATCTCGAGAAGCCTATTCCAGGATGCATGGGAAGAATGATCAACCTCTTTGATTTGGGTCCTGGCATGACGGGAAACAGGCTGCTCACGGATAAAGCACATCGAGATGGTTCTCCCCTCCCTAGGAGTCGACCAGATGTGGTAAAGAAGGTTTTGGATCCCATTGGAGATCAGTTAGAGGACGAACCCATAGGATATGAATTGAGAAGGTCTCCATCAAACAAGAAATCTCATGGAACACCTATGAAGATGCTCATAGCACAAGAAATGTCGAAAGAAACAGAGTCTAAGCAGAAGCCACCTAGTGTGGTCGCCAAGTTGATGGGGCTTGATGCCTTCCCAGGGCAGCAGCCCAACTCAGCAGCACAAAGATGCCAGCCTAAAGGTTATTCACGGAATAGTTTTACCCCCCCAGGGACACCACTGGGATATCAGCAGCAAGAAAGTGGATTCCATGACAAGCAAATGCAGCGTGAGATTCATCCATTTCGGGAGCATCAAGAATACAAAGATGTTTATGAAGTCTGGCATCAGTCTCCAAAAACCAATTACATTAAAGATAAATCACCACAAAAGGGAAGAAATAATGAATATCCAAATGAGAAAAAGATGGCCTTAGTTCGTCAGAAGTTCATTGAAGCTAAACGTTTAGCCACGGATGAAAAACTTCGCCAGTCGAGAGAATTTCAAGATGCATTAGAGGTTCTAAGTTCAAATAAAGATTTATTCCTCAAGTTTCTGCAGGAACCGAATTCCCTGTTCTCGCAGCATCTGTATGAACTACAGTCTATACCTCCACCTCCTCAGACGAAACGCATCACAGTACTGAGACCATCTAAGACAATGGAAAACAATAGGTTTGCTGGACCTGAGAAGACTGAAAAACAGATGAAGAAACAAGATCAGGTGTTTGAAGCAGATGGGTGGGACAAAAACAAACCTGGATTGACTCCTGTTTCTACGAATCAGAAGGCTGATAATTCTGCGCAACCAACCCGGATAGTGGTCTTAAAGCCTAGCCCTGGCAAGACCCCTGACATCAAGGCTGTGGTTTCTTCCCCTTCCTCATCGCCAAGACTGCTTCATAATAAAGATTTTTATGGAGAACCGGAAGTTGATGAGGCACGGTGTTCAAGAGAAGTTGCTAAGGAGATCACACGGCAGATGCGTGAAAGTTTGACCAGTCACCGGAGGGAGGAAACTTTGGTCTCTTCTGTGTTTTCCAATGGATACATCGGGGATGAAAGCTCGTTCAATAGGTCAGAAAATGAATACATAGAGGGGGGAAATCTCAGTGATTCAGAGGTCATGACACCAACTTCAAGACATTCGTGGGACTACATAAACAGATTTGGCAGTCCTTACTCATCTTCCTCTTTCAGCCGGGCATCCTATTCTCCAGAGTCATCAGTTTGCAGGGAAGCAAAGAAGCGGCTTTCAGAAAGGTGGGCCATGATGGCATCAAATGGAAGCGGTCAAGAGCAAAGACAAGTTCGTAGAAGCTCCAGTACATTGGGTGAGATGCTTGCTCTTTCTGATACGAAGAAGTCTGCAAGATCTGGTGAAGAGAAGATTGATGGAGGGCTGGGTGTCTTGAGTAGCAGGTCTTGTGGCGGTGAGCAAGATCTGAGGGGACCAACATTATGCTCGTCAAGTAGTAGGGATAAGGATGAAGGTGGGGAAGATTCTCCTAGGAATCTATTGAGGTCAAGATCTGTCCCAGTATCTTCTACAGCATATGGGGCCAGACTAAATGTTGAAGTTCCTGATCCCGAGGTCAGTAAATCCAATGTTCCTAAAGAAGTAGCAAAGTCGAAGAGTGGGAAATCATCATTCAAAGGGAAAGTTTCAAGTTTATTTTTCTCGAGAAATAAGAAACCAAGTAAAGAGAAATTTAGTGCATCTCCCTTGGCTGGCTCTCAAGATGAGCTTCAGTCTGCCATTGCCGAAATTCCAGGGGTTCCAAAACAGCCTTCTTCCAAAAAGGTAAGTGATGATATTCCTCAATGTGTTACAAACAGTGGCCATGAAGGAGGGCCATCATTGAGTCCAGGAGGATCATTGAGCAAGAGTTTCTCATCAACTTCCATCTGTGCAGAACCAAAACAGGGCACTTTTTCTGAGGCAGTGTTGTCTCTAGCAAAACCTGGGATGCCTGGAAACCCAAGTGAGAACCAAGACCAGCCGAGTCCCAGTTCAGTCTTGGAAGCACGATTCGAAGATGATGTTAATACGATTCCACAGTCTGGAAATGTCAAGTCAGAGCTCCAGGGACCACCTGTGCATCTTCAAACCCCTAACTCCAACTTGATTGCCAAATCTCCACCAATTGCATCGCTTGCTCGTTCCTTGTCATGGGATGATGCCTGCTCAGAAATAGCAACACCAGATCCACTAAACACCTCCATTGTCCCATCTGAGGCAGAGGAAGAACAAGTACAGTTTTTATTCGTCCAAAAATTACTCTCATACGCAAGCCTGGACTGTGAGGAGCAATCTGGTGCAGTCTTTGCCAGATGGCATTCACCAGAAAGCCCATTGGACCCATCGTTGATAGATAAATTTCTCAACGAGAAAGACGAGAAGGATCAGGGGCATGAGGCAAAGCGCAGGCAGCGGAGGTCAAACCAAAAGCTTATATTCGACTGTGTCAATGCAGCCCTGGTGGATATTGCGGGGTATAGGTCAGATGTGAGACTACGCGCAAGAGCGTCGGGTGGGGACCAAAATAGACACTTGGAAGTTGCACCAGTAACTGCAGAAGAAGTGTGGAGCCGAGTAAGGGAGTGGTTTTCTAGCGAGGCGCAGAGCTTTTTAGGTGAAAGTGGAGACAACAGCCTGGTGGTGAGGAAGGAGGTGGCAGGGAGTGGATGGGTTGAGCTTATGAGGTTGGAAGTAGATGGTATGGGTAAACAGATTGAAGGGGAGATGCTTGAGGAACTAGTGGAGGAGGCTTTGTTTGAATTAACAGGTCGGTTATGTTGA 3015 0.4597 MNGIQNTRAHNLEKPIPGCMGRMINLFDLGPGMTGNRLLTDKAHRDGSPLPRSRPDVVKKVLDPIGDQLEDEPIGYELRRSPSNKKSHGTPMKMLIAQEMSKETESKQKPPSVVAKLMGLDAFPGQQPNSAAQRCQPKGYSRNSFTPPGTPLGYQQQESGFHDKQMQREIHPFREHQEYKDVYEVWHQSPKTNYIKDKSPQKGRNNEYPNEKKMALVRQKFIEAKRLATDEKLRQSREFQDALEVLSSNKDLFLKFLQEPNSLFSQHLYELQSIPPPPQTKRITVLRPSKTMENNRFAGPEKTEKQMKKQDQVFEADGWDKNKPGLTPVSTNQKADNSAQPTRIVVLKPSPGKTPDIKAVVSSPSSSPRLLHNKDFYGEPEVDEARCSREVAKEITRQMRESLTSHRREETLVSSVFSNGYIGDESSFNRSENEYIEGGNLSDSEVMTPTSRHSWDYINRFGSPYSSSSFSRASYSPESSVCREAKKRLSERWAMMASNGSGQEQRQVRRSSSTLGEMLALSDTKKSARSGEEKIDGGLGVLSSRSCGGEQDLRGPTLCSSSSRDKDEGGEDSPRNLLRSRSVPVSSTAYGARLNVEVPDPEVSKSNVPKEVAKSKSGKSSFKGKVSSLFFSRNKKPSKEKFSASPLAGSQDELQSAIAEIPGVPKQPSSKKVSDDIPQCVTNSGHEGGPSLSPGGSLSKSFSSTSICAEPKQGTFSEAVLSLAKPGMPGNPSENQDQPSPSSVLEARFEDDVNTIPQSGNVKSELQGPPVHLQTPNSNLIAKSPPIASLARSLSWDDACSEIATPDPLNTSIVPSEAEEEQVQFLFVQKLLSYASLDCEEQSGAVFARWHSPESPLDPSLIDKFLNEKDEKDQGHEAKRRQRRSNQKLIFDCVNAALVDIAGYRSDVRLRARASGGDQNRHLEVAPVTAEEVWSRVREWFSSEAQSFLGESGDNSLVVRKEVAGSGWVELMRLEVDGMGKQIEGEMLEELVEEALFELTGRLC* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 723 743 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 729 743 - -
Eupl12g00346 1004 Pfam DUF761-associated sequence motif 103 126 IPR032795 -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 496 704 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 610 633 - -
Eupl12g00346 1004 Pfam Domain of unknown function (DUF4378) 825 994 IPR025486 -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 672 704 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 496 520 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 318 372 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 325 344 - -
Eupl12g00346 1004 Pfam Protein of unknown function (DUF3741) 218 262 IPR022212 -
Eupl12g00346 1004 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 1002 - -
Eupl12g00346 1004 MobiDBLite consensus disorder prediction 127 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00346 Eupl-Chr12 13417187 13423187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00346 1 1000 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.291 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00346 - - tss:122654789 1222.61