Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00332 ATGGGGTCTTCTAGCTTGAGAAACTTTCGAATCGTAGCCAACGACGATGCCACTCGAGCCTCGGCTCTGGAATATGCTGCGAGTGAAGAACACTTTCAACTCAAGAACAAACTGACCGCGCTTGTTGTCGACGACAGTAGGATGCATCGCTTGATTCACAGGACACTCCTGGTCAGTCTTGGTGTCGAGAGCCGTGAGGTGGTGAATGGAAAGGAAGCTGTGGATCTCTGCCATGCTGGGGAGGTCTTTGACCTCATCCTGATGGACATGGACATGCCTATCATGGATGGGCCTCAGGCGACAAGGGAAATGCGTGCGATGGGTATTCGTAGTATGATCGTGGGTGTCACTGCACGATCTCGAGCTAGGGAGATAGAAGCATTTATGGATGCAGGCATTGATGACTACCACGAGAAGCCGTTGACTAGCGCGAAGCTGATCTCTCTCCTCCGAGAACTTGACGACCGTTAG 471 0.5202 MGSSSLRNFRIVANDDATRASALEYAASEEHFQLKNKLTALVVDDSRMHRLIHRTLLVSLGVESREVVNGKEAVDLCHAGEVFDLILMDMDMPIMDGPQATREMRAMGIRSMIVGVTARSRAREIEAFMDAGIDDYHEKPLTSAKLISLLRELDDR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00332 156 CDD REC_hyHK_CKI1_RcsC-like 41 150 - -
Eupl12g00332 156 Gene3D - 23 155 - -
Eupl12g00332 156 ProSiteProfiles Response regulatory domain profile. 39 154 IPR001789 GO:0000160
Eupl12g00332 156 Pfam Response regulator receiver domain 41 150 IPR001789 GO:0000160
Eupl12g00332 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 154 - -
Eupl12g00332 156 SMART REC_2 38 150 IPR001789 GO:0000160
Eupl12g00332 156 SUPERFAMILY CheY-like 36 153 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00332 Eupl-Chr12 12972103 12973169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00332 32 155 Response Regulator Gene Family AT3G04280 44.094 5.13e-26 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl12g00332 Response_reg 6.4e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00332 - - ming:122090584 147.902