Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00331 ATGGGATCTTCGAGCTTGAGAAACTTCCGAATTGTAGCCAACGGCGATGCCGGAAAAGCCCCAGCTCGAGGAAAGGCTGCAAATGAAGAACAGTTTAAACTCAAGAACAAGCTGACTGCACTTGTTGTTGACAACAGTAGGCTGAACCGCCTGATTCACAGGACACTCTTGGTCAGTCTTGGTGTCGAGAGCCGTGAGGTGGAGAATGGGAAAGAAGCTGTGGATCTCTGCCATGCTGGGGAGGTCTTCGACCTCATCCTGATAGACATGGACTTACCTATCATTGATGGGCCTCAGGCCACGAGAATGATGCGTGCGATGGGTGTCCGTAGTAAGATTGTGGGTGTCACTGCACGATTTCTAGACAGGGAGAAACGAGTATTCATGGAAGCAGGCCTCGACGAATTCCATGAGAAGCCGTTGACTAGCGCTAATCTCATCTCTCTCCTCCGTGAACTGGACGACCGTTAG 471 0.5096 MGSSSLRNFRIVANGDAGKAPARGKAANEEQFKLKNKLTALVVDNSRLNRLIHRTLLVSLGVESREVENGKEAVDLCHAGEVFDLILIDMDLPIIDGPQATRMMRAMGVRSKIVGVTARFLDREKRVFMEAGLDEFHEKPLTSANLISLLRELDDR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00331 156 CDD REC_hyHK_CKI1_RcsC-like 41 150 - -
Eupl12g00331 156 ProSiteProfiles Response regulatory domain profile. 39 154 IPR001789 GO:0000160
Eupl12g00331 156 Pfam Response regulator receiver domain 41 150 IPR001789 GO:0000160
Eupl12g00331 156 SUPERFAMILY CheY-like 37 153 IPR011006 -
Eupl12g00331 156 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 154 - -
Eupl12g00331 156 Gene3D - 19 155 - -
Eupl12g00331 156 SMART REC_2 38 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00331 Eupl-Chr12 12948405 12950671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00331 22 155 Response Regulator Gene Family AT3G04280 40.876 3.32e-24 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl12g00331 Response_reg 2.2e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00331 - - msin:131247409 142.895