Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00322 ATGGCCATCCATGGGAAGGTTGAAGCACAAGACATCCAAGCACAAGCTCATCTCTGGAAAATCATCTATGGCTTCGCTGATACCCTCGTCCTCCGATGCGCCGTCGAGCTCGGCATCGTAGACATCATCAACAACAACAACAACAACAACGACAAGAAGCCTATCACACTATCCATCCTCGCGTCGAAACTTCCGATCTCCTCCGTCAATTCCGATCATCTGTACCGGATACTAAGGTACTTGGTGCACATGCGTATCATAAGAGAAGAGAATAATACTGAAGGTGCAAAGTGTTACATGCTTGAACCAGTCGCTACCTTGCTCTTAAGTGATGCAAAGACGACTATGGTCCCAATCATATTGGGGATGACGCAGAAAGATTTCATGGTGCCATGGCATTACATGAAAGATGGTTTAAGCGACGAAGGTACCGCGTTTGAGAAGGGGATGGGGATGACGATATGGGAATACCTTGAAGGACACCAAGACCAGAGCCAATTGTTCAATGAGAGCATGGCTGGTGAGACAAGGCTCCTTACGTCCTCACTTATCGATGGTTCTCGAGACTTGTTTGAAGGTATAACGTCTCTTGTCGACGTTGGAGGTGGAAATGGTACCACTATTAATGCCATATCGGAGGCATTTCCTCATATAAAATGCACCCTCTTCGATCTCCCGCATGTCATCGCCAACTCTTGCGACAACCCGAAAATCGAACGCATCCCCGGCGACATGTTTAAATCCGTACCTAGTGCTCAAGCCATCTTACTCAAGCTAATCTTGCACGATTGGAGTGACGATGACTGTGTTAAGATCCTAAAACAGTGCAAGGAAGCGGTGCCGAGTGAAGGGGGGAAGGTAATTATAGTGGATGTGGCACTGGACGAGGAATCTGAACACGAGCTTAGCAGCACGAGAATGATTCTGGATATCGATATGTTGGTGAACACAGGAGGTAAAGAAAGGAGTGAAGAGGACTGGGAGAAGTTGATTAAACGTGCAGGCTATCGAGGTTTCAAGATCAGGCAAATAGCGGCTATACAGTCAGTGATCGAGGCCTTTCCTTAG 1068 0.4728 MAIHGKVEAQDIQAQAHLWKIIYGFADTLVLRCAVELGIVDIINNNNNNNDKKPITLSILASKLPISSVNSDHLYRILRYLVHMRIIREENNTEGAKCYMLEPVATLLLSDAKTTMVPIILGMTQKDFMVPWHYMKDGLSDEGTAFEKGMGMTIWEYLEGHQDQSQLFNESMAGETRLLTSSLIDGSRDLFEGITSLVDVGGGNGTTINAISEAFPHIKCTLFDLPHVIANSCDNPKIERIPGDMFKSVPSAQAILLKLILHDWSDDDCVKILKQCKEAVPSEGGKVIIVDVALDEESEHELSSTRMILDIDMLVNTGGKERSEEDWEKLIKRAGYRGFKIRQIAAIQSVIEAFP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00322 355 Pfam O-methyltransferase domain 132 337 IPR001077 GO:0008171
Eupl12g00322 355 PANTHER O-METHYLTRANSFERASE 12 336 IPR016461 GO:0008168
Eupl12g00322 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Eupl12g00322 355 FunFam O-methyltransferase ZRP4 110 355 - -
Eupl12g00322 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 353 IPR029063 -
Eupl12g00322 355 Gene3D - 2 108 IPR036388 -
Eupl12g00322 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Eupl12g00322 355 SUPERFAMILY "Winged helix" DNA-binding domain 8 111 IPR036390 -
Eupl12g00322 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 355 IPR016461 GO:0008168
Eupl12g00322 355 Pfam Dimerisation domain 30 82 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00322 Eupl-Chr12 12635329 12637331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00322 7 341 Monolignol Biosynthesis Gene Families AT5G54160 35.277 4.14e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00322 - K22588 ag:BAB08005 545.428