Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00301 ATGGCTTCTCTGCAACTTTACTCTCTCTTCTTCTTCTTCTTCTTCCTCTTCTGCTGCTTCTGCTTCTCTACAAGTACTACTGCTACTAGTACCAGTTTCTCTAAGTCATCTTCAGATGTTGAGCTTCTCTTGGGTAAGATCAAAGTCTCTCTCCAAGGAAGCTCAGAGAATCTTGTGCTTTCTTCATGGAACTCTTCTGTTCCCCTTTGTCAATGGAGAGGACTCAAATGGGTCTTCTCTGATGGCTCTCCACTTCTCTGCGATGATGTTTCCTCCCCTGACCGGACTAATGTTTCGCTTTTCCGAAACCCATCTCTGCAACTCCTCTCTCTTCAGCTACCAGCCGCGGGTCTCTCAGGAGAAATCCCCAGAGAAATCGGCGAGCTCTCTTCGTTGCAGAGTCTCTACCTTGGTGTTAACTCACTCGAAGGTAACGTCCCTCTTGAGCTAGGATATAGTGCTTCGCTCTCTGATGTTGATTTGGGAGGCAACTCCTTAAATGGGTCTCTCCCTCCTTCGATCTGGAACCTCTGTGATCGACTTGTTTCGCTTCGCATGCACGGTAACAACCTCTCTGGTTCTCTTCCTGAACCCGCATTACCCAACTCTACTTGCAAGAATTTAGAAATTTTGGATTTGAGTAACAATAAGTTTGAGGGGCAGTTTCCGGATTTTATAACTCGGTTTCATGGTTTGAAAGAGCTTGATCTTGGCAATAATCTGTTTTCTGGTTCGATTCCAGAGAGTCTAGATGGGTTGAACCTTGAAAGATTGAATCTTTCTTACAATAATTTTAGTGGGATGTTACCTGTTTTGGGAAAACTGAAGTTCGATGCCGAGGTTTTTGAAGGAAACAATCCTGGGCTTTGTGGGTCTCCTCTGGGGAAATGCACTAGAAAGAGCTCTGGTTTGAGCTCTGGTGCCATTGCAGCTATTTTGATTGGGCTTATGACGGGTGCAGTGGTTTCAGCTTCAGTATTAATTGGATATGTACAGGGAAAGAGGAGGAAAAACAGGGAAAGAAATGGAGATGAGATAGAGGAAGGAGAAGAAGAGGAGAATGGTGGTGGTGGTGGTGGTGGTGGTGGGGGTGAGGGGAAGCTTATTTTGTTTCAAGGTGCTGAGCATTTGACATTAGAGGATGTGTTGAACGCTACAGGTCAGGTTCTTGAGAAAACAAGCTATGGTACCATTTATAGAGCAAAACTTGAGGACGGAGGAAACATTGCTCTGAGGTTGTTAAGAGAAGGTAGTTGCAAGGATGGAGGTTCTTGCGTGCCAGTGATAAGGCAGCTTGGCCGAGTTCGCCATGAAAATTTGGTTCCACTTCGAGCTTTCTATCAGGGACAGAGAGGAGAGAAGCTCCTCATTTATGACTATTTCCCTAACAAAACCTTACATGATCTTCTACATGAGACCAAGGCAGGGAAACCAATGCTGAACTGGGCTCGGCGGCACAAGATAGTGTTGGGTATAGCCCGAGGACTAGCATATCTGCATACGGGTCTTGAAGCACCCATCACCCACGGGAGCGTGAGATCGAAAAATGTCATAGTGGACGAATTTTTTATGGCCAGGCTGACTGAATATGGGCTCGACAAGCTGATGGTCCCCGCCGTCACTGATGAGATGGTGGCCATCGCAAAAACAGATGGCTACAAGGCTCCGGAGCTGCAGAAGATGAAGAAGTACAATTCGAGGACTGATGTGTACGCATTCGGAATACTGTTGCTGGAGATATTACTGGGTAAAAAGCCTGGTAAGGATGGGAGAACTGGGGAATTTGTGGATTTGCCGTCGTTGGTGAAGGTGGCAGTGTTGGAGGAGACGACAATGGAGCTTTTTGACCTGGAGGTGTTGAAGGGGATTAGGAGTCCAATGGAGGATGGGTTAGTTCAGGCGATGAAGCTTGCAATGGGTTGTTGTGCTCCCGTAGCTTCGGTTAGACCCGACATGGATGAGGTTGTTAAGCAATTAGAGGAGAACAGACCCAGGAACAGATCTGCTCTATACAGCCCAACTGAAACAAGGAGTGAAATAGGTACACCCTTTTAA 2055 0.4657 MASLQLYSLFFFFFFLFCCFCFSTSTTATSTSFSKSSSDVELLLGKIKVSLQGSSENLVLSSWNSSVPLCQWRGLKWVFSDGSPLLCDDVSSPDRTNVSLFRNPSLQLLSLQLPAAGLSGEIPREIGELSSLQSLYLGVNSLEGNVPLELGYSASLSDVDLGGNSLNGSLPPSIWNLCDRLVSLRMHGNNLSGSLPEPALPNSTCKNLEILDLSNNKFEGQFPDFITRFHGLKELDLGNNLFSGSIPESLDGLNLERLNLSYNNFSGMLPVLGKLKFDAEVFEGNNPGLCGSPLGKCTRKSSGLSSGAIAAILIGLMTGAVVSASVLIGYVQGKRRKNRERNGDEIEEGEEEENGGGGGGGGGGEGKLILFQGAEHLTLEDVLNATGQVLEKTSYGTIYRAKLEDGGNIALRLLREGSCKDGGSCVPVIRQLGRVRHENLVPLRAFYQGQRGEKLLIYDYFPNKTLHDLLHETKAGKPMLNWARRHKIVLGIARGLAYLHTGLEAPITHGSVRSKNVIVDEFFMARLTEYGLDKLMVPAVTDEMVAIAKTDGYKAPELQKMKKYNSRTDVYAFGILLLEILLGKKPGKDGRTGEFVDLPSLVKVAVLEETTMELFDLEVLKGIRSPMEDGLVQAMKLAMGCCAPVASVRPDMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00301 684 Gene3D Ribonuclease Inhibitor 178 252 IPR032675 -
Eupl12g00301 684 Gene3D Ribonuclease Inhibitor 41 177 IPR032675 -
Eupl12g00301 684 MobiDBLite consensus disorder prediction 665 684 - -
Eupl12g00301 684 FunFam Leucine-rich repeat receptor-like protein kinase 205 297 - -
Eupl12g00301 684 MobiDBLite consensus disorder prediction 338 361 - -
Eupl12g00301 684 Pfam Leucine rich repeat 207 265 IPR001611 GO:0005515
Eupl12g00301 684 Pfam Protein tyrosine and serine/threonine kinase 387 659 IPR001245 GO:0004672|GO:0006468
Eupl12g00301 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 197 IPR046959 -
Eupl12g00301 684 MobiDBLite consensus disorder prediction 663 684 - -
Eupl12g00301 684 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 99 195 - -
Eupl12g00301 684 ProSiteProfiles Protein kinase domain profile. 384 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00301 684 Gene3D Transferase(Phosphotransferase) domain 1 461 677 - -
Eupl12g00301 684 ProSiteProfiles Leucine-rich repeat profile. 254 276 IPR001611 GO:0005515
Eupl12g00301 684 Gene3D Phosphorylase Kinase; domain 1 367 460 - -
Eupl12g00301 684 Gene3D Ribonuclease Inhibitor 253 301 IPR032675 -
Eupl12g00301 684 SUPERFAMILY L domain-like 69 294 - -
Eupl12g00301 684 SUPERFAMILY Protein kinase-like (PK-like) 387 660 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00301 Eupl-Chr12 11961031 11963896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00301 1 684 Receptor kinase-like Gene Family AT3G24660 71.241 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl12g00301 PK_Tyr_Ser-Thr 5.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00301 - - nnu:104587911 1027.31