Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl12g00292 ATGATTGAAGTCCTGGACTTTTGTTTATTTCAGAATTCCAGTTCTGGGTTTTCTTTCTTTCAATCTGGAAATGTTGTTTGTTCGGTTTCGTTTTTAATTTCGATTGATTCAGCGTTTAGAATGCCGGGTTTTTTCAAATCGGTGAGGGTTTGGGTTCTTGGTTTTACTGGATTTGTACTTGTATCTGCTCTACTGGTTTGTTGTTCCGAGGGGCTAAACGCTGAGGGGCAATACCTCCTGGAACTGAAGAGTGTCCTACACGATGAATTTAACCATCTGGGTAGTTGGAATTCTAGTGATCAAACACCGTGTGGATGGACTGGTGTGACTTGCACCCCTGACTACGATCCAGTGGTCTGGTCTCTCGACCTGAGTTCCATGAATCTATCTGGAGCTCTGTCGCCAAGTATCGTTGGTTTAGTCCACCTGACTTGTCTCAACGTGTCTTACAATGGTTTCTCTGGGACTATACCCAAGGAGATTGGGAATTGTTCGAGGTTGGAGGGTCTTTATCTCAACAACAATCAGTTTGAAGGTGAAATCCCCGTCGAATTGTGTAATCTGTCTTGTTTAGCAGAATTAAATTTTTGCAATAACAGAATCTCTGGACCTTTGCCAGAGGAGCTTGGAAACCTTTCTTCCCTGGTGCAATTAGTTGCATATACTAACAATCTCACGGGCCCGTTACCTCGTTCTATTGGGAATCTCACAAGATTGAGAACTTTTCGAGCAGGGCAGAATTTGATTTCTGGTAGCATACCTACGGAGATAAGTGGATGTGAGAGCTTGGTATTACTGGGTCTCGCCCAAAATCAGTTAGGAGGCGAAATACCTAAAGAGATTGGAATGCTCGATAACTTGACGGATCTGATACTTTGGGGAAATGGGTTGTCTGGGGTTATCCCAAAGGAGCTTGGGAATTGTACAAAGCTCGAGTCTCTGGCTTTGTATGAAAACAGTCTTCTTGGTGAGATACCCATGGAGATTGGGAACCTCAGGTTTCTGAAGAAGTTGTACCTTTACAGGAATGGGTTGAATGGGACGATCCCAAAGGAGGTCGGACAGCTTTCTCTAGTAACAGAAATCGACTTCTCAGAGAACTGGTTGAAGGGAGAGGTACCAAAAGAGTTCAGTAAGATAAAGGGTTTACGCTTACTCTATCTTTTCCAGAATCAGCTTACGGGTGTTATCCCAGATGAGCTATGCAGCTTAAGGAATTTGAGTAAGCTCGATCTCTCTATCAATTACCTCACAGGTCCTATCCCGGTCGGGTTTCAGTATTTGACTGAATTGCTCCAGTTACAGCTCTTCCACAATTCTCTGAGTGGTAGTATTCCTCAAGGTCTCGGAGTGTATAGCCGACTTTGGGTAGTTGACTTTTCAGAGAACAATCTCACCGGTCAAATACCTCATCATCTTTGCAGACATTCTAACCTGATTTTGTTGAACCTAGGGTCAAACAAACTGACTGGAAATATCCCTCCTGGGGTAACAAATTGCAAATCGTTGGTGCAGCTTCGTCTAGTTGGAAACAGCCTTACGGGGAGCCTTCCTTCTGACCTATGCAAATTGTTTAACCTCACCACTGTCGAATTGGACCAGAACAAGTTCAGTGGCCCTATTCCTCCAGAAATTGGGAACTGCAAAACTTTGCAAAGGCTTCACCTTTCAGACAATTACTTTACATCTGAGTTGCCAAGAGAGATAGGTAATCTGTCCCGGCTTGTAACATTTAATATTTCGTCTAATATGCTCACTGGACGAATACCGAGTGAAATTGTCAACTGCAGGATGCTTCAACGACTTGATCTCAGCCGGAATAGATTTGTAGATGCCTTACCAGACGAGTTTGGAAGCCTTTTCCAGTTGGAGCTACTCAAGCTTTCAGAAAATAAACTTTCAGGGAATATACCTGTGGCATTTGGAAATCTCTCTCGTTTGACTGAGTTACAGATAAGTGGTAACGCCTTTTCTGGCGGGATACCGCCGGAGTTGGGTGCTCTTTCGAGCTTACAGATTGCGATGAATCTCAGTTATAATAATCTTTCTGGGAAGATACCGCCTGAGCTTGGGAATCTTGTTTTACTAGAATTCCTCCTTCTCAACAATAACCATTTGACTGGTGAAATTCCAGACACATTCGGAAACTTGTCAAGTTTACTGGGGTGCAATGTATCGTACAATGACCTGATTGGACCCTTACCTTCTATACCACTGTTTCAAACAATGGAAATCAGCAGTTTTATCGGAAACAAAGGGCTTTGTGGTGGGCCTCTTGGCGCATGCAGTGGATCTCCATCTTCCCAATCTTTTCTGCCAACATCGGAAGGAGCAGGTGCTCCTCTGGTTAAAATCATTGCAATAATAGCGGCAGCTGTGGGTGGGGTTTCTCTCATTTTAATTGTGATTATTGTCTATTTCATGAGACGTCCAGTTGAGATTGTTGCTCCATTGCAAGAAAAACAATTATCTTCGGTTTCGGACATGTACTTTTCCCCAAAAGATGGGTTCAATTTCCAAGATCTTGTTGAAGCAACGAATAATTTTGATGACAGTTTTGTTATTGGAAGGGGTGCTTGTGGAACAGTTTACAGGGCAGTAATGCAATCTGGACAGATAATTGCTGTTAAAAAGCTGGCGTCTAATAGAGAGGGGAACAATGTTGAAAACAGTTTCCGCGCTGAGATTTTAACTCTTGGAAAGGTTAGGCACCGAAATATTGTGAAGCTTTATGGTTTCTCTTACCACCGGGGTTCCAATATACTTCTCTATGAGTACATGTCGAACGGCAGCTTGGGTGAATTGCTTCATGGGGAATCTTGTAGCCTGGACTGGCAGACACGGTTCATGATTGCTCTTGGGGCTGCTCAGGGGCTCTCTTATTTACACCATGATTGCAAGCCTCAGATCATTCACCGAGATATAAAGTCCAATAACATTCTACTTGATGATAACTTTGAAGCTCATGTTGGGGATTTCGGATTGGCAAAGGTGATTGACATGCCACAATCTAAATCAATGTCCGCAGTTGCCGGTTCATATGGGTACATTGCCCCTGAATATGCGTACACCATGAAAGTTACGGAAAAATGTGATATATATAGCTATGGGGTTGTTCTATTGGAGTTGCTGACTGGAAGAACACCTGTACAACCACTAGAGCGAGGAGGTGACCTTGTTACGTTGGCGAGGAATTATATTGAGAAACATTCTTTGACATCTGGTATACTTGACGCTCGATTAAATCTAGAAGATGAGGATACTGTTGATCACATGATCACTGCCTTTAAAATTGCTTTACTGTGCACAAGTATGTCTCCTTTTGACCGGCCAACAATGCGACAAGTTGTATTGATGCTGATTGAGTCTAATGAGAGAGAAGGGGACATTGTTTCCTCTCCAATCTATGATCTTCCTTCGAAGGATGATACCTTGTGA 3438 0.4311 MIEVLDFCLFQNSSSGFSFFQSGNVVCSVSFLISIDSAFRMPGFFKSVRVWVLGFTGFVLVSALLVCCSEGLNAEGQYLLELKSVLHDEFNHLGSWNSSDQTPCGWTGVTCTPDYDPVVWSLDLSSMNLSGALSPSIVGLVHLTCLNVSYNGFSGTIPKEIGNCSRLEGLYLNNNQFEGEIPVELCNLSCLAELNFCNNRISGPLPEELGNLSSLVQLVAYTNNLTGPLPRSIGNLTRLRTFRAGQNLISGSIPTEISGCESLVLLGLAQNQLGGEIPKEIGMLDNLTDLILWGNGLSGVIPKELGNCTKLESLALYENSLLGEIPMEIGNLRFLKKLYLYRNGLNGTIPKEVGQLSLVTEIDFSENWLKGEVPKEFSKIKGLRLLYLFQNQLTGVIPDELCSLRNLSKLDLSINYLTGPIPVGFQYLTELLQLQLFHNSLSGSIPQGLGVYSRLWVVDFSENNLTGQIPHHLCRHSNLILLNLGSNKLTGNIPPGVTNCKSLVQLRLVGNSLTGSLPSDLCKLFNLTTVELDQNKFSGPIPPEIGNCKTLQRLHLSDNYFTSELPREIGNLSRLVTFNISSNMLTGRIPSEIVNCRMLQRLDLSRNRFVDALPDEFGSLFQLELLKLSENKLSGNIPVAFGNLSRLTELQISGNAFSGGIPPELGALSSLQIAMNLSYNNLSGKIPPELGNLVLLEFLLLNNNHLTGEIPDTFGNLSSLLGCNVSYNDLIGPLPSIPLFQTMEISSFIGNKGLCGGPLGACSGSPSSQSFLPTSEGAGAPLVKIIAIIAAAVGGVSLILIVIIVYFMRRPVEIVAPLQEKQLSSVSDMYFSPKDGFNFQDLVEATNNFDDSFVIGRGACGTVYRAVMQSGQIIAVKKLASNREGNNVENSFRAEILTLGKVRHRNIVKLYGFSYHRGSNILLYEYMSNGSLGELLHGESCSLDWQTRFMIALGAAQGLSYLHHDCKPQIIHRDIKSNNILLDDNFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLERGGDLVTLARNYIEKHSLTSGILDARLNLEDEDTVDHMITAFKIALLCTSMSPFDRPTMRQVVLMLIESNEREGDIVSSPIYDLPSKDDTL* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl12g00292 1145 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 231 322 - -
Eupl12g00292 1145 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 71 230 - -
Eupl12g00292 1145 SMART serkin_6 849 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00292 1145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 970 982 IPR008271 GO:0004672|GO:0006468
Eupl12g00292 1145 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 511 1120 - -
Eupl12g00292 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 452 766 - -
Eupl12g00292 1145 SUPERFAMILY L domain-like 425 755 - -
Eupl12g00292 1145 Gene3D Phosphorylase Kinase; domain 1 813 926 - -
Eupl12g00292 1145 Gene3D Ribonuclease Inhibitor 71 223 IPR032675 -
Eupl12g00292 1145 Gene3D Transferase(Phosphotransferase) domain 1 927 1133 - -
Eupl12g00292 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 324 428 - -
Eupl12g00292 1145 Gene3D Ribonuclease Inhibitor 453 766 IPR032675 -
Eupl12g00292 1145 SUPERFAMILY L domain-like 358 442 - -
Eupl12g00292 1145 Gene3D Ribonuclease Inhibitor 285 359 IPR032675 -
Eupl12g00292 1145 Gene3D Ribonuclease Inhibitor 224 284 IPR032675 -
Eupl12g00292 1145 Pfam Leucine rich repeat 599 656 IPR001611 GO:0005515
Eupl12g00292 1145 ProSiteProfiles Protein kinase domain profile. 849 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00292 1145 SUPERFAMILY L domain-like 74 367 - -
Eupl12g00292 1145 SMART LRR_typ_2 524 548 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 644 668 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 332 356 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 284 308 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 188 212 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 428 452 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 620 643 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 140 164 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 572 596 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 597 619 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 404 427 IPR003591 -
Eupl12g00292 1145 SMART LRR_typ_2 693 716 IPR003591 -
Eupl12g00292 1145 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 927 1135 - -
Eupl12g00292 1145 Pfam Leucine rich repeat N-terminal domain 73 111 IPR013210 -
Eupl12g00292 1145 Pfam Protein kinase domain 854 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl12g00292 1145 FunFam Leucine-rich repeat receptor protein kinase MSP1 815 926 - -
Eupl12g00292 1145 SUPERFAMILY Protein kinase-like (PK-like) 829 1120 IPR011009 -
Eupl12g00292 1145 Gene3D Ribonuclease Inhibitor 360 452 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl12g00292 Eupl-Chr12 11594883 11602704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl12g00292 72 1122 Receptor kinase-like Gene Family AT4G26540 37.431 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl12g00292 Pkinase 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl12g00292 - - nnu:104589146 1752.64